| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1482 |
|---|
| Symbol | |
|---|
| ID | 3766299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 1390447 |
|---|
| End bp | 1391649 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637798019 |
|---|
| Product | putative permease |
|---|
| Protein accession | YP_397978 |
|---|
| Protein GI | 78779866 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0253141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAACTTT CAAATCAATC CCTAATTAAA AAAACTATTT CCAAAATAAT TACTCCTTGG
TATGCAATAG CTTTAATAGA TAGATGGTTA TTAGGTCAAA TAATACCTCC AATGTTATTT
GCCATTTCTG CTTTTACTGT GATTTCTCTT TCAGTGGGTG TAATGTTTGA TTTGATAAGA
AAAATAGTTG AATATGGCTT ACCTGTATTA AAAGCTTTAC AAGCTTTAAT TTATAGCCTT
CCTAGCTTTT TAGTTTTATC ATTTCCTATG GCTGTATTAT TGTCCACACT ATTATCTTAT
GGAAAGCTAT CAGCCAATTC TGAATTATTA GCTTTAAGGT CATTAGGAAT TAAAACCTCT
CGGATCATAG CTCCGGCCAT TGCAGTTTCA ATATTCATGA CAGGATTAAC TTTTTATTTC
AATGATAATC TAGTTCCCAA TAGTAATAAG CTTGCTGAAT TGACATTGAG ATCAGGAGTA
GGAAGTTCTT TTAATAGAGA AAAATCTAAA AATAACATTA TTTTTTCTAG AAAAGGATCA
AGAATAGATA CTAATAATAA GCCAACAAAA ACAAATACTT TCCTAACTCA TATTTTCTAC
GCTTCGCGTT TTGAAAACAA TACTATGAGG GAAGTTACAG TTTTAGACTT TTCCAGAGTA
AATATAAAGC AAATTCTCAC TGCAAAAAGT GCCGTATTTG ATAAAAAAAA CTCTTCCTGG
GTATTCGCAG ATGGGAGTAT TGTCTCAACT GACTCTACTG GTCAAACAAC AAGTATTAAT
TTCAAACAAT ATTTATATCC CTTTGTTGAA GGCCCATTAG ATCTTGCAAG AGTTCCAAAG
GATGCAAGCG ATATGTCTTT AAAAGAAGCT TTAGAGGCAG AAAGAATATA TAAAAAGATA
GGAGATCTGA AGCAGATTAG AAAGATTCAA GTACGAATCC AAGAAAAATT TACTTTACCT
TGTGCATGTT TGGTCTTTGG ATTGATAGGT AGTATTTTGG GATCTCAATC TAATTTAAGA
TCTTCAAAAA GTCAGGGTTT TGGATTGAGT GTAATTCTGA TATTAATGTA TTATGTGATT
TCATTTATAT GCAGTTCTTT TGGGGTCAAG GGATTACTTC CTCCAATAAT TGCAGCTTGG
TTTCCAGTAA TAATTTCTCT TTCTGGTGGA TTTTATTTCT TAAGAAATTC AAATTATAAA
TGA
|
|---|
| Protein sequence | MKLSNQSLIK KTISKIITPW YAIALIDRWL LGQIIPPMLF AISAFTVISL SVGVMFDLIR
KIVEYGLPVL KALQALIYSL PSFLVLSFPM AVLLSTLLSY GKLSANSELL ALRSLGIKTS
RIIAPAIAVS IFMTGLTFYF NDNLVPNSNK LAELTLRSGV GSSFNREKSK NNIIFSRKGS
RIDTNNKPTK TNTFLTHIFY ASRFENNTMR EVTVLDFSRV NIKQILTAKS AVFDKKNSSW
VFADGSIVST DSTGQTTSIN FKQYLYPFVE GPLDLARVPK DASDMSLKEA LEAERIYKKI
GDLKQIRKIQ VRIQEKFTLP CACLVFGLIG SILGSQSNLR SSKSQGFGLS VILILMYYVI
SFICSSFGVK GLLPPIIAAW FPVIISLSGG FYFLRNSNYK
|
|---|
| |