Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1466 |
Symbol | |
ID | 3766283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1375190 |
End bp | 1375939 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637798003 |
Product | GAF domain-containing protein |
Protein accession | YP_397962 |
Protein GI | 78779850 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2203] FOG: GAF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.105134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAATC TTGTGTCAAA AAAAGAAGAT GAGGAAAGAA GATTAAAATC TTTAGCAGAA TATAGAATTT TGGGAACCAA GCCAGAATCA TGTTATGACG ATATTACAAA AATTGCGGCT GCAACTTGTA ATGTGCCTAT TTCTTTAATG ACTTTGGTTG ACAAAGATAG ACAATGGTTT AAGTCCAAAG TTGGACTTCA AATATCAGAA ACTAGAAGAG ATTGGTCTTT TTGTACCCAT GCAATAAAAG AAAATAGTCC ACTAATTATT CATGATGCTT TCCAAGATGA AAGATTTATA AATAATCCAT TGGTAACAGG AGACCCAAAG ATTCGTTTTT ATGCAGGTTT CCCCCTAAAA ACTAGTGATG GTAATAAGCT TGGAACTCTT TGTGTAATAG ACAGAAAGCC AGGAAATCTA ACTACACAAC AATTCAACAT CATGGAATTA TTATCCAGGC AAATAGTTTC ATTCTTAGAG CTTAGAAAAA AGTCATTAAA CTTGCTAGAT GCATTGTCTA ATTTGCATAA ACAGGAAGGG ATTTTATCTG TATGTTCATA TTGCAGAGAA GTAAAAAATA AGGAGGGAGA TTGGATGCAT TTGGAAAAAT ATCTTTCAAA AATTAGTGAT ATTAGATTTA GTCATGGGGT TTGTGATAAT TGCATGGAAA AACATTTCCC TGATGTAATC GAAGTATGGA ATAAAAAGGA TTTTTTTGAA GATGGTCAAA AAAGGTATTT AGAGTCTTAG
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Protein sequence | MQNLVSKKED EERRLKSLAE YRILGTKPES CYDDITKIAA ATCNVPISLM TLVDKDRQWF KSKVGLQISE TRRDWSFCTH AIKENSPLII HDAFQDERFI NNPLVTGDPK IRFYAGFPLK TSDGNKLGTL CVIDRKPGNL TTQQFNIMEL LSRQIVSFLE LRKKSLNLLD ALSNLHKQEG ILSVCSYCRE VKNKEGDWMH LEKYLSKISD IRFSHGVCDN CMEKHFPDVI EVWNKKDFFE DGQKRYLES
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