Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1459 |
Symbol | |
ID | 3766276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1369920 |
End bp | 1370849 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637797996 |
Product | short-chain dehydrogenase/reductase |
Protein accession | YP_397955 |
Protein GI | 78779843 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.392397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCCA CTATTTCTAG ACCTACGATT TCTAATTGGG AAACATCTGA TATTCCTAAT CTTAATGGAA AAACTGCACT TATTACTGGT GCAAATAGTG GCCTTGGATA TTACACGGCA AAGGCCTTAG CCGAAAAAAA TGCCCATGTA ATCCTGGCAT GTAGATCACT TGAAAAAGCT AATAAATCTA TTCAAAAGCT TAGAGCTTCA AATCCTGAAG GAATATTTTC TCCACTTGAA TTAGATTTAT CAGATTTAAA TAATGTTGTT GAAATTCAAC CCAAAATTTT TGATGATTTT GAAAATCTGG ATTTACTAAT CAATAATGCA GGCATAATGC ACCCGCCTAA AACACTTAGT GCTCAGGGAT ATGAAATACA ATTTGCAGTT AATCATTTAG CTCATATGCT TTTGACCCTA AAGCTTCTTC CAATTATTGA AAAAAAAGAG GAGTCGAGAA TAGTAACGGT TACTTCTGGT GCACAATTTT TTGGCAAAGT TGGCTGGAAA AATCTGAAAG CAGAGAACTA TTACAACAAA TGGGAATCTT ACTCCAATAG CAAATTGGCA AATGTAATGT TCGCATTGGA ACTAAATGAA AACTTAAAGC CCAAAAATAT ACTTTCTTTA GCTGCTCACC CAGGGATAGC AAAAACAAAT CTTTTTACTG CTCAAAAACC TAAACCTAGT CCAATCGAAA CATTCTCCAT GGAATTATTT AGCCCTATTT TTCAATCCGC TGAGATGGGT GCCTTACCTC AACTTTTTGC AGCTACTTCT CCAGAGGCAA GAGGCGGAGA TCATTATGGT CCTAAATTTA ATTTCAGAGG TTATCCAAAA CTATCGCCTA CTTCTCCTGT TGCCATTAAT AAAAAAGAAA GAAAAAATTT ATGGGAAAAA AGCCTTCAAA TACTGAGTAA TTTCTTATAA
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Protein sequence | MTATISRPTI SNWETSDIPN LNGKTALITG ANSGLGYYTA KALAEKNAHV ILACRSLEKA NKSIQKLRAS NPEGIFSPLE LDLSDLNNVV EIQPKIFDDF ENLDLLINNA GIMHPPKTLS AQGYEIQFAV NHLAHMLLTL KLLPIIEKKE ESRIVTVTSG AQFFGKVGWK NLKAENYYNK WESYSNSKLA NVMFALELNE NLKPKNILSL AAHPGIAKTN LFTAQKPKPS PIETFSMELF SPIFQSAEMG ALPQLFAATS PEARGGDHYG PKFNFRGYPK LSPTSPVAIN KKERKNLWEK SLQILSNFL
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