| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1445 |
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| Symbol | |
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| ID | 3766261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 1357704 |
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| End bp | 1358627 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 637797981 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_397941 |
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| Protein GI | 78779829 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA AAGATGGATT CTTAGTAATT AATAAAGATA AAGGCTGCAC CTCTCATGAT
TGTGTTAAAC AAATAAGGAA GTTGTTAAAT ACAAGAAAAG TTGGACACAC AGGAACTCTT
GATCCAGAGG TTATAGGAAC ATTACCAATT GCAATAGGGA GTGCAACAAG ATTCATTCAA
TATCTTCCTC AGGGTAAAAC TTATATTGGA CAAATTAAAT TAGGGATAAG AACTAACACT
GATGATATTC ATGGAGAAAT AATTAATCAA AAATGTTGGC CTAAAATCAG TGATGAGAAA
TTAGATCAAT ATTTAAATAA ATTCAGAGGA TTAATTAAAC AAATTCCGCC AAAAGTATCT
AGTGTTCATG TTAATGGTGA GAGAGCTTAT AAAAAATCTT TTAATAATGA AAATTTTGAA
TTAGCACCCA GAGAAGTAAA AATAGACGAA CTCATTTTAA TGAAATGGGA CCAAATAAAC
GGAATCATAG AACTAAAAAT CAATTGTTCT GCTGGTACAT ATATAAGGGC AATTGCAAGA
GATTTAGGTG AAATTCTTAA TTCCGAGGGG TGCCTTCTAC AGCTAAAAAG AATTTCAGCT
TGTGGATTTC ATGAAAAAAA CTCTATAAAA ATATCTGATA TTAAAAAAGG AATAGACCAA
AAAAATGCGT CAAATTTTAT TATTCCAACA ATTTCTGCTC TTAATCACAT TTCAACATTA
ATCTTAAATA AAGAAGAAGA TATCAATTTT TGGCAAACTG GAAGAGCAAT TAAATTTGAT
ATTAATTACT TTAATGAAGG TAACAATTTT GATAATAAAA AACCCATAAA GGTAGTAGAT
AAAAGAAAAA TGCTACTCGG GATTGGCTTC TTAAATAAAG AACTAACTAA TATAAACCCA
AAATTAGTCC TTAATGCAAA ATAA
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| Protein sequence | MENKDGFLVI NKDKGCTSHD CVKQIRKLLN TRKVGHTGTL DPEVIGTLPI AIGSATRFIQ
YLPQGKTYIG QIKLGIRTNT DDIHGEIINQ KCWPKISDEK LDQYLNKFRG LIKQIPPKVS
SVHVNGERAY KKSFNNENFE LAPREVKIDE LILMKWDQIN GIIELKINCS AGTYIRAIAR
DLGEILNSEG CLLQLKRISA CGFHEKNSIK ISDIKKGIDQ KNASNFIIPT ISALNHISTL
ILNKEEDINF WQTGRAIKFD INYFNEGNNF DNKKPIKVVD KRKMLLGIGF LNKELTNINP
KLVLNAK
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