| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1440 |
|---|
| Symbol | |
|---|
| ID | 3766256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 1354118 |
|---|
| End bp | 1355614 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637797976 |
|---|
| Product | circadian clock protein KaiC |
|---|
| Protein accession | YP_397936 |
|---|
| Protein GI | 78779824 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
|---|
| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTAC AAAAATTGCC TACAGGTATA GAAGGCTTCG ATGATGTTTG CAGAGGTGGT
TTGCCTGTAT CTCGAAGTAC ACTTATTAGT GGTACTTCAG GTACTGGCAA AACTGTTTTT
TCGCTTCAAT ACTTGCACCA TGGAATTTGC AACTTTGATG AGCCTGGTAT CTTCGTTACA
TTTGAGGAGT CCCCTTTAGA TATCATTAGA AATGCTGCAA GTTTTGGTTG GGATTTACAA
GAATTAATTG ATCAAAATAA ACTTTTTATT TTAGATGCTT CTCCTGACCC CGATGGTCAA
GATGTTGCGG GCAACTTTGA CTTATCTGGT CTTATTGAAA GAATTAGTTA TGCGATTAGA
AAATATAAAG CTAAAAGAGT TGCAATAGAT TCAATAACTG CAGTTTTTCA ACAGTATGAC
GCCATTTACG TTGTTAGAAG AGAAATTTTT AGACTAATAG CAAGATTAAA AGAAATAGGA
GTAACAACAG TTATGACTAC AGAAAGGGTT GATGATTATG GACCTATTGC TAGGTATGGA
GTAGAAGAAT TTGTATCTGA TAATGTTGTC TTATTAAGAA ATGTTCTTGA GTCAGAGAAG
AGAAGAAGAA CTTTAGAAGT TTTGAAGTTA AGAGGAACTG TACATATGAA AGGAGAATAT
CCATTCACTA TGGGAGCCGA TGGTATAAGT GTATTCGCAC TTGGAGCAAT GCGATTAACA
CAGCGATCCT CAAATATTAG GATTAGCTCT GGAGTGAAAG ATCTTGATGA TATGTGTGGT
GGAGGATATT TTCAAGATTC GATTATCCTT GCCACAGGAG CTACTGGTAC AGGTAAGACA
ATGCTCGTAT CAAAATTTGT GGAAGATGCG TATAACAACA ATGAAAGAGC AATACTTTTT
GCATATGAAG AATCCAGGGC TCAATTGCTT AGGAATGCTA CTAGTTGGGG AATAGACTTT
GAAAAGATGG AAAGTGATGG GTTATTAAAA ATTATTTGTG CATATCCTGA ATCAACTGGT
TTGGAAGATC ACTTACAAAT AATAAAAACG CAAATTAATC AATTTAAACC CAAGAGAATG
GCAATAGATT CTCTCTCAGC TTTAGCCCGA GGTGTAAGTT TGAATGCATT TAGACAGTTT
GTAATTGCAG TCACTGGTTA TACAAAACAA GAAGAAATAG CAGGATTTTT TACTAATACT
GCAGAAGAAT TCATGGGAAG TCATTCTATT ACTGATTCTC ACATCTCAAC AATTACAGAT
ACTATATTAT TGCTCCAATA TGTTGAAATA AAAGGAGAGA TGGCTAGAGC ATTAAATGTT
TTTAAAATGC GAGGATCATG GCATGATAAA CGAATAAGAG AATTTATAAT CACCAATAAA
GGTCCCGAAA TCAAAGATTC TTTTTCTAAC TTTGAACAGA TATTTAGTGG TGCCCCTCAT
AGGGTAGTTC CTGATCAAAA TGTTCAGAAT ATTTTTAGAG GACTAGATAA TAATTAG
|
|---|
| Protein sequence | MQVQKLPTGI EGFDDVCRGG LPVSRSTLIS GTSGTGKTVF SLQYLHHGIC NFDEPGIFVT
FEESPLDIIR NAASFGWDLQ ELIDQNKLFI LDASPDPDGQ DVAGNFDLSG LIERISYAIR
KYKAKRVAID SITAVFQQYD AIYVVRREIF RLIARLKEIG VTTVMTTERV DDYGPIARYG
VEEFVSDNVV LLRNVLESEK RRRTLEVLKL RGTVHMKGEY PFTMGADGIS VFALGAMRLT
QRSSNIRISS GVKDLDDMCG GGYFQDSIIL ATGATGTGKT MLVSKFVEDA YNNNERAILF
AYEESRAQLL RNATSWGIDF EKMESDGLLK IICAYPESTG LEDHLQIIKT QINQFKPKRM
AIDSLSALAR GVSLNAFRQF VIAVTGYTKQ EEIAGFFTNT AEEFMGSHSI TDSHISTITD
TILLLQYVEI KGEMARALNV FKMRGSWHDK RIREFIITNK GPEIKDSFSN FEQIFSGAPH
RVVPDQNVQN IFRGLDNN
|
|---|
| |