Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1435 |
Symbol | lpxC |
ID | 3766251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1346822 |
End bp | 1347670 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637797971 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_397931 |
Protein GI | 78779819 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTTTCTT GGCCTACTAA TTATGATTCT TGCTTCACCT TGGCTGGTGT TATCTCCAGA GAAGGAATAG GCCTTCATAG TGGAGAAAAA ACAAGACTTA AAATATCTTC TTATGAAAAA GAAGGATATT ATGTTTCTTT CAGAGATAAA CCCAATGAGA TTTTTAAGCT AACTCAAGAT TTAATTGGAA GTTCGATGCT TTGTACGGCG GTTAAATTAG GAGGGAGGAA TTTATATACT ATTGAACATT TATTATCTTC AATGGCTGGT TGTGGGTTAA GTTATATTCA TATCGAAGTT GATGGGAGAG AGATCCCGCT TTTAGATGGA TCCGCAATTC AGTGGGTTAG AGCTTTTGAA GAAGTAGGCA TAAAGAAGGC ACCTAAACCA GATAATTTTT TTCGAGAAAT TAATAAATCA ATAATTTTAA ATAAAGAAGG CTCAGTTATA GCAGCAACTC CCTCTGAAAA AACTACAATT ATATCAACAA TAAGTTTTTC TTATAAAGTA ATTGGAAACC AAACTTTTGT GATTGATTTA AATCCAAAAA GTTTTGTTGA AATGATTGCT CCAGCAAGAA CATTTGGTTT TAAGGATCAA TTTCAGGAGT TAAGTGAACT TGGATTAATA AAAGGAGGAA GTTTAGAAAA CGCTCTCGTT TGTGATGGTG ATGCATGGGT TAATCCACCG TTAAGATTTA ATAATGAACC AATAAGACAT AAAATTTTAG ACCTAATTGG GGACTTGGCT TTGGTAGGGT TACCTAAGGC ACAAATTTTA GTTTATAAAG GATCACATTC TTTAAATGCT TTATTAGCCT CATCGCTAAA AAATCAACCT TATCTTTAA
|
Protein sequence | MFSWPTNYDS CFTLAGVISR EGIGLHSGEK TRLKISSYEK EGYYVSFRDK PNEIFKLTQD LIGSSMLCTA VKLGGRNLYT IEHLLSSMAG CGLSYIHIEV DGREIPLLDG SAIQWVRAFE EVGIKKAPKP DNFFREINKS IILNKEGSVI AATPSEKTTI ISTISFSYKV IGNQTFVIDL NPKSFVEMIA PARTFGFKDQ FQELSELGLI KGGSLENALV CDGDAWVNPP LRFNNEPIRH KILDLIGDLA LVGLPKAQIL VYKGSHSLNA LLASSLKNQP YL
|
| |