Gene PMT9312_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1421 
Symbol 
ID3766237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1334978 
End bp1336324 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content35% 
IMG OID637797957 
ProductGPH family sugar transporter 
Protein accessionYP_397917 
Protein GI78779805 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTCTT ATGGGCTAGG AGATGCAGGA ACGGGTTTAG TCGCGACGCA ATTTGGTTTT 
TTCCTGTTCA AATTCTTTAT TTCTGCTGGT TTACCAGTAA TAATTGCAGG CTCATTATTA
ATGTTAATAA AAATATGGGA TGCAGTAAAT GATCCGTTAA TTGGATGGTT AAGTGATCGT
ACTAAATCAA GATGGGGCCC CAGAATACCT TGGATGGTGG CAGCATCTGT TCCTCTTGGT
TTGTCTTTAG CTGCAATTTG GTGGACTCCA TCAGGTTCAG TGCTCAACAA AACTGTTTAC
TATGCCTTAA TTTCTATAGT CGTAATGACT GCTTATACAA GTATTAATCT TCCTTTTGCA
GCCCTATCAA CTGAAATTTC TGAAAAAACA GCCATAAGAA CAAGGTTAAA CGCATCTAGA
TTTACTGGCT CAATAATTGC TGGACTAACT GGCTTGATAA TCGCTGGATT TGTTTTAGGT
TCTGAAGGAT CAGCAAATAA TGAATATTTT TTAATGGGTA AAATAAGTGG GTGTATTGCA
GTTACCACAA CATTAATATC CTGTTGGGGA TTGGCTCCAT TTGCAAAAAA AGCAAGAAGA
CCTTCAGGGA AAGCAGAAGC CATAACACTT CAATTCAAAA GGATCTTCAG AAATAAAAAA
TTTCTCAAAG TTATTACGCT TTATATTTTG CTCTGGTGCG CCTTACAATT AATGCAAACA
GTAGCGTTAA TCTATGTAGA GGATGTACTT AGGGTGCCAA CAGATATTGC GAAATGGATC
CCGATACCTT TCCAAATTAG CGCCTTAATA GGTTTACAAA TATGGACAAG AGTATCAAAT
AGATTGAATA GAATTTCAGC CTTAAACTAT GGAGCGATTA TGTGGATTAT TTCATGTACA
GGAGCTTTAT TTTTACCTTC TTTATCAAAA GTTTCAGAAG TTGAGGATAT CCTACTTCTA
AATACAAGCA ATATACTTTT GTTCATCCTT TTAATATTTA TAATCTGTCT TATTGGCATT
GGAGCTTCAA CTGCTTTTCT TATACCTTGG TCGCTACTTC CTGATGCAAT AGACGAAGAT
CCAGAAAAAC CAGCAGGATT ATATACTGCT TGGATGGTAC TTATTCAGAA GATTGGCATC
GCATTAAGTG TTCAATTATT AGGCTTTTTG TTGTATTTAT CTGGTTATCA ATCATGCTTT
GTTGATAAAG ATAGTTTAAA TATTATTGAA CAATGTACAT CCGCACAATT AACGATTAGA
TTATGTATTG GTTTTATACC CTCAGTATTA GTAATAATTG GTCTTTTAGT TATGAGGGGA
TGGGATCGAA AATTAATTAA GAACTAA
 
Protein sequence
MFSYGLGDAG TGLVATQFGF FLFKFFISAG LPVIIAGSLL MLIKIWDAVN DPLIGWLSDR 
TKSRWGPRIP WMVAASVPLG LSLAAIWWTP SGSVLNKTVY YALISIVVMT AYTSINLPFA
ALSTEISEKT AIRTRLNASR FTGSIIAGLT GLIIAGFVLG SEGSANNEYF LMGKISGCIA
VTTTLISCWG LAPFAKKARR PSGKAEAITL QFKRIFRNKK FLKVITLYIL LWCALQLMQT
VALIYVEDVL RVPTDIAKWI PIPFQISALI GLQIWTRVSN RLNRISALNY GAIMWIISCT
GALFLPSLSK VSEVEDILLL NTSNILLFIL LIFIICLIGI GASTAFLIPW SLLPDAIDED
PEKPAGLYTA WMVLIQKIGI ALSVQLLGFL LYLSGYQSCF VDKDSLNIIE QCTSAQLTIR
LCIGFIPSVL VIIGLLVMRG WDRKLIKN