Gene PMT9312_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1409 
Symbol 
ID3766224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp1325728 
End bp1326837 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content35% 
IMG OID637797944 
ProductPIN domain superfamily protein 
Protein accessionYP_397905 
Protein GI78779793 
COG category[R] General function prediction only 
COG ID[COG4956] Integral membrane protein (PIN domain superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATA TCTTAGTATT AATTTTATTT GTATTGTCTG GCGCTGCTTC AGGATGGCTT 
GGGGTTGATT TATTGCCCGT AGACATACTC AAACAGGTAT CTAATGTAGA GGGTTTTAGA 
ATTGTTTTAG CGATAATAGG TCTTTTTATA GGATTAGCAG CTGGTTTTGT ATTCCTTCAA 
CTTAGAAAAA CGTTTCTTGA TCAAATAAGA ACAATGCCTA CGGACTTATT AATAAGTAGG 
TCAGTTGGAT TAATTTTAGG ATTACTTGTT GCGAATCTCT TACTTGCTCC AATACTATTA 
ATTCCCTTCC CAAGAGAAGT TTTTTTTGCA AAACCCTTAG CAGCTATATT AAGCAACATT 
TTCTTTGGTG TGCTTGGTTA TAAGTTAGCC GATACCCATG GAAGGACATT ATTGAGAATA 
TTCAATCCAA ATAATACTGA TGCATATCTA GTGAATGAAG GAATACTTCC TGCTGCAAGT 
CCAAAAATTC TAGATACCAG TGTAATTATC GATGGCAGAA TCAATGGCCT ATTAAGTTGC 
GGCTTATTGG AAGGTCAAAT AATTGTTGCT CAAAGTGTAA TTGATGAATT ACAAACTCTA 
GCTGATTCAA GCAGTAACGA AAAAAGGTCA AAAGGCAGAA GAGGTCTTAA ATTATTGAAA 
GAATTAAGGG ATTTATATGG GAGAAGACTC GTAATAAACC CAACAAAGTA TGAAGGTAAT 
GGGGTAGATG AAAAACTCTT GAAAATTACT GAGGATATGA CAGGGACTTT AATTACGGCT 
GATTATAACC TCTCTCAGAT TGCTGAAGTT AAAGAATTAA AAGTTATGAA TTTGAGTGAT 
TTGGTTATTG CTTTAAGGCC AGAAGTACAG CCAGGAGAAT CACTAAATAT AAAAATCGTG 
AGAGAAGGCA AAGAAAAAAT GCAAGGTATT GGATATTTAG ATGACGGAAC AATGGTTGTT 
ATTGATGAGG CTAAGAATTT TGTGGGAAGC AGATTAGACA TTGTCATCAC AGGAGCATTA 
CAAACTCCCA CTGGAAGAAT GGTCTTTGGA AAACTAATAA ATAATCCTGA GTCAAACAAA 
TCTTTTAAAT CACCAGCGAC ACAGGGCTAA
 
Protein sequence
MTDILVLILF VLSGAASGWL GVDLLPVDIL KQVSNVEGFR IVLAIIGLFI GLAAGFVFLQ 
LRKTFLDQIR TMPTDLLISR SVGLILGLLV ANLLLAPILL IPFPREVFFA KPLAAILSNI 
FFGVLGYKLA DTHGRTLLRI FNPNNTDAYL VNEGILPAAS PKILDTSVII DGRINGLLSC 
GLLEGQIIVA QSVIDELQTL ADSSSNEKRS KGRRGLKLLK ELRDLYGRRL VINPTKYEGN 
GVDEKLLKIT EDMTGTLITA DYNLSQIAEV KELKVMNLSD LVIALRPEVQ PGESLNIKIV 
REGKEKMQGI GYLDDGTMVV IDEAKNFVGS RLDIVITGAL QTPTGRMVFG KLINNPESNK 
SFKSPATQG