| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1387 |
|---|
| Symbol | mnmA |
|---|
| ID | 3766199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 1302124 |
|---|
| End bp | 1303281 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637797920 |
|---|
| Product | tRNA-specific 2-thiouridylase MnmA |
|---|
| Protein accession | YP_397883 |
|---|
| Protein GI | 78779771 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAGA CACAAAAGGA TAAAAAATTA GAGAACAATT TTTCTAATAA TAATAAAACT
AAAAAGAAGA AAAATATTAT TGTAGGTCTT TCTGGTGGCG TAGATAGTTC CCTTTCAGCT
GCTCTTCTTG TAGAAAGTGG CTGGGATGTT GAGGGACTAA CTCTTTGGCT AATGAAAGGA
CAAGGCTCCT GTTGTTCTGA AGGATTAGTA GATGCTGCTG GCCTTTGTGA AGATTTAGGA
ATTAATCATA AAATAATAGA TTCAAGAGAA ATTTTCGAAA GAGAGGTAAT TAAAAAAACT
ACTGAAGGCT ACGAGAAAGG ATTCACTCCA CTTCCATGTT CGATGTGCAA TAAGAATGTG
AAGTTTGAAG AGATGCTTAA TTACGCAATA AACAAAAAAG ACTTTACTCA TATTGCGACA
GGACATTACG CAAGGATAAA AAAATCATCT TATGCTGAAA CACTTGATTA CAAGAGCTTT
GTATTTAAGG ACTTCCTTCT GCTCAGAGGT ACTGACGAGA ACAAAGACCA AAGTTATTTT
CTTTATTCTC TTTCACAAGA AGTACTAAGC AGATTAGTAT TTCCTCTTGG TGAAATGAAA
AAAGAAGAAA CTAGAAAGGA AGCCCTGAGA TTAGGCCTTA GAACCGCTCA AAAACCAGAA
AGTCAAGATT TATGTTTAGT TGAGCATTAT GGATCAATGC AGAGATTTAT CGACAAACAC
ATTGAACCCA AAGAAGGAGA AATAATACAT GTAAATGGGA AAGTCCTAGG CACTCACAAT
GGTATTCATC ACTTTACAAT AGGCCAAAGA AAAGGTTTGG GCATTGCTTG GCCTGAACCA
TTATATGTAA AAAGTTTAGA CAGGGTAAAA AACATTGTTT ATGTGGCAGA TAAAAGTGAT
CTATTTAATA GAGAAGCAAT AATTAGTAAG GTTAACTGGG TTTCAATAGA AGAACCTAAG
CAAGAGATAG AAGTAGAAGC ACAAATCAGA TATAGAAGTC ATCCAGTAAA AGGAACTTTA
ATACCTATGA AAAATTCAGA TAATCCAGCG AATACATTTA AATTAATTTT TGAAGAAAGT
CAAAGTTCGG TAACGCCCGG ACAAGCTGCA GTTTTTTATA AAGGGGAAAT TTTATTAGGT
GGTGGATTAA TTAATTAA
|
|---|
| Protein sequence | MLKTQKDKKL ENNFSNNNKT KKKKNIIVGL SGGVDSSLSA ALLVESGWDV EGLTLWLMKG
QGSCCSEGLV DAAGLCEDLG INHKIIDSRE IFEREVIKKT TEGYEKGFTP LPCSMCNKNV
KFEEMLNYAI NKKDFTHIAT GHYARIKKSS YAETLDYKSF VFKDFLLLRG TDENKDQSYF
LYSLSQEVLS RLVFPLGEMK KEETRKEALR LGLRTAQKPE SQDLCLVEHY GSMQRFIDKH
IEPKEGEIIH VNGKVLGTHN GIHHFTIGQR KGLGIAWPEP LYVKSLDRVK NIVYVADKSD
LFNREAIISK VNWVSIEEPK QEIEVEAQIR YRSHPVKGTL IPMKNSDNPA NTFKLIFEES
QSSVTPGQAA VFYKGEILLG GGLIN
|
|---|
| |