| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1384 |
|---|
| Symbol | |
|---|
| ID | 3766196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 1298354 |
|---|
| End bp | 1299427 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637797917 |
|---|
| Product | pyruvate dehydrogenase E1 alpha subunit |
|---|
| Protein accession | YP_397880 |
|---|
| Protein GI | 78779768 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACAA ATCAAAACTT CATTAAGGTA TTTTTCTTGG AAACACATGT AGAGAGAATC
TCAAATCTTC AAGACATAAA AAAAGCCAAA TTAGATCGAG AAACCGGATT ATTTCTTTAT
GAAGACATGA CGCTTGGTCG AAGATTCGAA GATAAGTGTG CAGAAATGTA TTACAGGGGG
AAAATGTTTG GTTTCGTTCA TTTATATAAC GGGCAAGAGG CTATAAGCAC GGGAGTAATT
GGTGCTATGA GAAAGAAACA TGATTGGTTT TGTAGCACTT ACCGCGATCA TGTTCATGCA
CTAAGCGCTG GTGTTCCCTC CTTTGAAGTA ATGAGTGAAC TTTTTGGTAA AGCTACAGGT
TGTAGCAAAG GCCGAGGGGG GTCCATGCAC TTATTTTCAA AAGAGCATCA CTTACTAGGA
GGATATGCAT TTATTGGAGA AGGAATTCCA GTAGCTTTAG GTGCAGCCTT TTCAAGTAAA
TACAAAAAGG AAGTTGCTGG CAATAATAGT AGTGATTCTG TAACTGCAGC ATTCTTTGGA
GATGGGACTT GCAATAATGG GCAGTTTTTT GAATGTTTAA ATATGGCCCA ATTATGGAAA
TTACCCATAA TTTTTGTTGT TGAGAATAAT AAATGGGCTA TTGGTATGGC TCACGATAGA
GCCACTAGCA ATCCTGAAAT CTGGAGAAAA GCCTCTGCTT TTGGAATGCA TGGCGAGGAA
GTTGATGGGA TGGATGTATT AGCAGTGAGA GGAGCGGCAC AAAGAGCAAT TGAGCGTGCT
AGAGCGGGAG AAGGGCCCAC ACTTTTAGAA TGCTTGACTT ATAGATACAG AGGACATTCT
CTTGCAGATC CAGATGAATT AAGGTCTGAA AGAGAGAAAG AGTTTTGGAG TAAAAGAGAT
CCCATTAAGA AATTAGCCCA CGAAATTATT AATGGTAAAT TTGCAACGGA AGAAGAATTA
AAAATTATTG AGAAGAAAAT TGATACCGAA ATATCTGAGT CAGTTAAAAA TGCTTTAGAA
GCACCTGAAC CTCCTTCACA AGAATTAACT AAATATATTT GGGCTGAAGA TTAG
|
|---|
| Protein sequence | MLTNQNFIKV FFLETHVERI SNLQDIKKAK LDRETGLFLY EDMTLGRRFE DKCAEMYYRG
KMFGFVHLYN GQEAISTGVI GAMRKKHDWF CSTYRDHVHA LSAGVPSFEV MSELFGKATG
CSKGRGGSMH LFSKEHHLLG GYAFIGEGIP VALGAAFSSK YKKEVAGNNS SDSVTAAFFG
DGTCNNGQFF ECLNMAQLWK LPIIFVVENN KWAIGMAHDR ATSNPEIWRK ASAFGMHGEE
VDGMDVLAVR GAAQRAIERA RAGEGPTLLE CLTYRYRGHS LADPDELRSE REKEFWSKRD
PIKKLAHEII NGKFATEEEL KIIEKKIDTE ISESVKNALE APEPPSQELT KYIWAED
|
|---|
| |