| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1376 |
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| Symbol | trmD |
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| ID | 3766188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1290128 |
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| End bp | 1290865 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637797909 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_397872 |
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| Protein GI | 78779760 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0454926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAGTT TTAATATTGA TGTAATTACA TTATTACCTA AAGCTTTTGA ATTAATTAAG
AATTTAGGTG TTATAACAAG AGCTCTAGAT AAGAATTTGA TTAATGTTAA TTTACATGAT
TTAAGAGAAT ATGGAGAAGG TTCTTACAGA CAAGTAGACG ATAAGCCTTA TGGCGGAGGA
GCAGGAATGG TCTTAAAACC TGGCCCTATT TTTAAAGCGC ATGAATCAAT TAATAAATTT
CCTAAAAGTA AAACTTTATT GATGACCCCA CAGGGTAAAG TCTTAAAGCA AAAGGATTTT
GTGAGATGGT CAACTTTGGA TCAAATAATA ATTATTTGTG GTCAATATGA AGGTTTTGAT
GAAAGGGTTA GATGCTTAGC TGATGAGGAG ATATCTATAG GAGATTATGT ACTTTCTGGA
GGAGAAATTC CTGCGTTGTC AATAATTAAC GGTTTGACCA GATTATTGCC AGGAACACTT
GGGGATCCAG ATTCTTTGGT TAATGAGAGT CATAACTCAC CTTTATTAGA GCACCCACAG
TATACTAGAC CTCAAATTTT TAGGGATATG AAAGTTCCAG ATGTTCTCAT TAATGGTAAT
CATAAAGAAA TTGAACTTTG GAGAGAAGAG CGGATGTTAA AAAGAACAAT TAAAAGAAGA
AAAGATCTAA TTAAAAATGA ATTTTGTGAT TTGCCAATCG ATGAATATGA TGGAGATGAT
TGGCTCTGGG ATTTATAG
|
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| Protein sequence | MNSFNIDVIT LLPKAFELIK NLGVITRALD KNLINVNLHD LREYGEGSYR QVDDKPYGGG
AGMVLKPGPI FKAHESINKF PKSKTLLMTP QGKVLKQKDF VRWSTLDQII IICGQYEGFD
ERVRCLADEE ISIGDYVLSG GEIPALSIIN GLTRLLPGTL GDPDSLVNES HNSPLLEHPQ
YTRPQIFRDM KVPDVLINGN HKEIELWREE RMLKRTIKRR KDLIKNEFCD LPIDEYDGDD
WLWDL
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