| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1365 |
|---|
| Symbol | surE |
|---|
| ID | 3766177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 1282928 |
|---|
| End bp | 1283737 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637797898 |
|---|
| Product | stationary phase survival protein SurE |
|---|
| Protein accession | YP_397861 |
|---|
| Protein GI | 78779749 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCGT TAAATATATT AATTAGTAAT GATGATGGTG TTTTTGCAGA GGGATTAAGA
GCTTTAGCCA AATCAGCACA GAAGAGAGGT CATAAGGTAA CAGTAGTATG TCCTGACCAA
GAAAGATCAG CTACTGGTCA TGGTCTTACT TTGCAATCTC CACTAAGAGT GGAAAGGGCA
GACGAATTAT TTGAGAGAGG GATCAAAGCT TGGGGATGTT CGGGCACGCC TGCTGATTGC
GTCAAATTAG CATTATCTGA GCTCTTGGAT AATAAACCTG ATCTAGTTCT ATCTGGAATA
AATCACGGGC CAAATTTAGG GACAGATATT TTTTGTTCAG GCACTGTTGC AGCAGCCATG
GAGGGAACTT TAGAAAATGT TCCCTCCATG GCAATAAGTG TTGCGAGTTT TAAATGGAAG
AATTTTGAAT TTGCTGGAGA AATGGCAATA AATATTGCAG AACAAGCAAT TAAGGATAGT
TGGCCACCTT CACTTCTACT AAATTTGAAT ATTCCTCCCT GCGAGAAAAA TAAAATAAAA
GAATTATCCT GGACAAGATT ATCAATCAGA AAATATAAAA ATCAATTTTC TAAACGGGAA
GACCCAAGGG GTGATGATTA TTATTGGTTA GCAGGTGAGG TAGTTTTAGA TCTTAAATCA
AAAGGTTACG GTCCAAAAAA TTGGCCCAGT GATGTATCTC AAATACAAGA AAATAAAATA
TCGCTTACAC CCGTTGAACC AGATTTATTT TGGAGAGGTG GTTTGGAGTT ATTGCCTAAG
ATAAATAATT CATTTGTAAA TCCTTCTTAA
|
|---|
| Protein sequence | MESLNILISN DDGVFAEGLR ALAKSAQKRG HKVTVVCPDQ ERSATGHGLT LQSPLRVERA
DELFERGIKA WGCSGTPADC VKLALSELLD NKPDLVLSGI NHGPNLGTDI FCSGTVAAAM
EGTLENVPSM AISVASFKWK NFEFAGEMAI NIAEQAIKDS WPPSLLLNLN IPPCEKNKIK
ELSWTRLSIR KYKNQFSKRE DPRGDDYYWL AGEVVLDLKS KGYGPKNWPS DVSQIQENKI
SLTPVEPDLF WRGGLELLPK INNSFVNPS
|
|---|
| |