Gene PMT9312_1358 details

Gene Information

• Locus tag: PMT9312_1358
• ID: 3766170
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: -
• Start bp: 1275686
• End bp: 1277548
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637797891
• Product: cell division protein FtsH3
• Protein accession: YP_397854
• Protein GI: 78779742
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAATAA GACAAGACGA TAATCAACCT AATAGAAGAT TTGGAATTGT AAATATCATT 
TTGATAGGAG TTGGAGCATT ACTTTTGTTT AGTAGCCTTT TCCCTAGTCA AAATATGCAG 
ATACCGAGAG TTCCCTACTC CTTATTTATA GATCAGGTTA ATGATGGGGA AGTTAAAAGA 
GCGTACATAA CACAGGAGCA AATCAGGTAT GAACTTAATG GTGCTGAAGA AGGTGCACCT 
TCAGTTTTAG CAACCACCCC AATTTTTGAT ATGGATCTTC CACAAAGGTT GGAGAGTAAA 
GGGGTTGAAT TCGCTGCTGC TCCTCCAAAG AAACCTAATT TCTTTTCAAC TATCTTGAGC 
TGGGTTGTTC CGCCTTTAAT TTTTATTCTT GTTCTGCAAT TCTTTGCTAG AAGAAGTATG 
GGAGGCGGAG GTGCTCAAGG AGCTCTAAGT TTTACTAAAA GTAAAGCTAA AGTATATGTA 
CCCGATGATG AATCAAAAGT AACTTTTGCA GATGTGGCAG GGGTTGACGA AGCTAAGGAC 
GAATTAACGG AAATCGTTGA TTTCTTAAAA AAACCTGAGA GATATACAGA TATTGGTGCC 
CGAATTCCAA AGGGAGTTCT TCTTGTAGGC CCTCCAGGAA CAGGAAAAAC TCTTCTTTCA 
AAAGCTGTTG CTGGAGAAGC AGAAGTTCCA TTCTTCATTA TTTCTGGCTC TGAATTTGTT 
GAGCTTTTTG TAGGTGCAGG TGCAGCAAGA GTCAGGGATT TATTTGAGCA AGCTAAGAAA 
AAAGCCCCTT GCATTATTTT TATTGACGAA TTAGATGCTA TTGGTAAAAG TCGTTCAGGA 
TCAATGGGAG TAGTTGGTGG TAATGATGAG AGAGAACAAA CTTTAAATCA GCTTCTTACC 
GAAATGGATG GATTTGCCTC TGCTGATAAG CCTGTTATAG TACTTGCTGC TACTAACCAG 
CCCGAAGTGC TTGACGCGGC CCTTCTAAGA CCAGGAAGAT TTGATAGACA GGTTTTAGTT 
GATAGACCAG ATTTATCCGG CAGAAAAACT ATATTAGAGA TCTACACAAA AAAAGTTAAA 
CTTTCAGATT CAATAGATTT AGATTCTATA GCTCAAGCTA CAAGTGGGTT TGCCGGTGCA 
GACCTGGCAA ATATGGTTAA TGAAGCAGCT CTTCTAGCAG CTAGAGCAAA GAGGAAAAGT 
GTTGAACAAC AAGACTTAAG TGAGGCTATT GAAAGAGTAG TTGCTGGTCT TGAGAAGAAA 
AGTAGAGTTC TCCAAGATGA TGAGAAGAAA GTTGTTGCTT ATCACGAAGT AGGCCATGCA 
ATTGTTGGTC ATTTAATGCC AGGAGGTTCA AAAGTTGCAA AAATTTCAAT AGTGCCAAGA 
GGAATGAGCG CACTTGGATA TACTCTTCAA TTGCCTACTG AGGAGAGATT TCTTAATTCA 
AAAGAAGAAT TAAAAGGTCA GATAGCAACA CTCTTAGGCG GCCGGTCTGC AGAAGAGGTG 
GTTTTCGGAA AAATTACTAC AGGTGCTTCT AATGATCTTC AAAGGGCTAC AGATATAGCA 
GAACAAATGG TAGGCACATT TGGCATGAGC GATATTCTTG GTCCACTTGC TTATGATAAA 
CAAGGTGGTG GGCAATTCTT GGGTAATGGT AATAATCCAA GAAGGTCAGT TAGTGATGCT 
ACAGCTCAAG CGATAGATAA AGAAGTAAGA GATCTAGTAG ATGATGCTCA CGAAACTGCA 
TTGAACATTT TAAGGAATAA TTTACCATTA CTTGAATCAA TTTCACAAAA AATTCTTGAA 
GAAGAAGTTA TTGAGGGTGA GGAGTTGAAA AATCTGCTTT CAGAATCTAA GTTACCTGCA 
TAG 

 

Protein sequence

MPIRQDDNQP NRRFGIVNII LIGVGALLLF SSLFPSQNMQ IPRVPYSLFI DQVNDGEVKR 
AYITQEQIRY ELNGAEEGAP SVLATTPIFD MDLPQRLESK GVEFAAAPPK KPNFFSTILS 
WVVPPLIFIL VLQFFARRSM GGGGAQGALS FTKSKAKVYV PDDESKVTFA DVAGVDEAKD 
ELTEIVDFLK KPERYTDIGA RIPKGVLLVG PPGTGKTLLS KAVAGEAEVP FFIISGSEFV 
ELFVGAGAAR VRDLFEQAKK KAPCIIFIDE LDAIGKSRSG SMGVVGGNDE REQTLNQLLT 
EMDGFASADK PVIVLAATNQ PEVLDAALLR PGRFDRQVLV DRPDLSGRKT ILEIYTKKVK 
LSDSIDLDSI AQATSGFAGA DLANMVNEAA LLAARAKRKS VEQQDLSEAI ERVVAGLEKK 
SRVLQDDEKK VVAYHEVGHA IVGHLMPGGS KVAKISIVPR GMSALGYTLQ LPTEERFLNS 
KEELKGQIAT LLGGRSAEEV VFGKITTGAS NDLQRATDIA EQMVGTFGMS DILGPLAYDK 
QGGGQFLGNG NNPRRSVSDA TAQAIDKEVR DLVDDAHETA LNILRNNLPL LESISQKILE 
EEVIEGEELK NLLSESKLPA