Gene PMT9312_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1317 
Symbol 
ID3766126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1228713 
End bp1229771 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content29% 
IMG OID637797847 
ProductUDP-galactose 4-epimerase 
Protein accessionYP_397812 
Protein GI78779700 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.218499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGTA ATAATGTTTT AGTGACTGGT GGTATTGGTT ATATAGGGAT CCACACCTGC 
TTTACATTAC TTGAAAGAGG ATATAACGTA TATGTTCTAG ATTCATTAAT AAATAGTTCT
GAAAAGACAC TTGAAATAAT TAAGGAATAT AGTAAATCAC TTAATTCAAA AGGTTTTAAG
AATATATTTA AATTTTATAA AGGTGATATT CGGAATATAA AAAATATAGA AAATGTATTT
TCAGATGCAC TTTTGAATTC AAAACCAATT GGTGGTGTAA TTCATTTCGC TGGGAAAAAG
TCAGTAAATG AATCTATTAA TTTCCCAATG GAATATTGGG AAACAAACCT CTTAGGAACA
ATTAATTTGA TTAGGGTAAT GAATAGTTAT AGTTGCTTCA ATTTTATTTT TAGTAGTAGT
GCTTCAGTAT ATGGAAAAAA TTCAATAAGT CCTATTAAAG AATTTGAAAG GATTGAACCA
ATAAATCCTT ATGGGAATAC AAAAGCTACA ATTGAAAAGT TTCTAATAGA TGTTTTCAAC
AGTAAACCAA ATTCTTGGAG GATTATCTTA TTGCGATACT TTAATCCAAT AGGCTCACAC
CCTAGCGGAT TAATTGGAGA ATCACCTTTA GAAGAATCAA CAAATATTTT TCCAAAAATT
TGTGAAGTTG CGATTAGGGA GAACAATGCG TTTAAAATTT ATGGTAATGA TTGGCCTACA
AAAGATGGTA CTTGTATCAG GGATTATATT CATATTATGG ATTTAGTTGA AGGACACATT
TGTTCTTACA ATCATCTTCT GTCTCATGAT CCTGAAATAA ATGCTTTTAA TTTAGGGACT
GGTAAAGGTA CAAGTGTACT TGAATTATTA TCTATTTTTC AGGAAGTGAA TAAATGTAAA
ATATTTTATG AATATGAACA ACCTAGGAAA GGAGATGTAG GGGTATGTTT TGCTGATAAC
ACTAAGGCAA AAAAGATTAT GAATTGGTAC CCAAAAAAGT CAATAAATGA AATGTGTAAA
GATGGATGGA GATGGTATAA AAGTAACTTT AAAAATTGA
 
Protein sequence
MSSNNVLVTG GIGYIGIHTC FTLLERGYNV YVLDSLINSS EKTLEIIKEY SKSLNSKGFK 
NIFKFYKGDI RNIKNIENVF SDALLNSKPI GGVIHFAGKK SVNESINFPM EYWETNLLGT
INLIRVMNSY SCFNFIFSSS ASVYGKNSIS PIKEFERIEP INPYGNTKAT IEKFLIDVFN
SKPNSWRIIL LRYFNPIGSH PSGLIGESPL EESTNIFPKI CEVAIRENNA FKIYGNDWPT
KDGTCIRDYI HIMDLVEGHI CSYNHLLSHD PEINAFNLGT GKGTSVLELL SIFQEVNKCK
IFYEYEQPRK GDVGVCFADN TKAKKIMNWY PKKSINEMCK DGWRWYKSNF KN