Gene PMT9312_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1316 
Symbol 
ID3766125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1227408 
End bp1228511 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content34% 
IMG OID637797846 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_397811 
Protein GI78779699 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.508169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTTA GCACTGATAT GAATGACAAG AATATTAAAA AAATTGCATT AATTACTGGA 
ATTACTGGCC AAGATGGTAG TTATCTTGCA GAATTTTTAC TTAATAAGGG ATATCAAGTT
CATGGGATTA AAAGAAGGTC TAGTAGTCTG AATACATCGA GAATCGATCA TCTTTATCAA
GACCCTCACG AATTAAACCA AAATTTTATT CTTCATTATG GTGATTTAAC AGACTCTACG
AATTTGATAA GAATTATTCA AGATGTTCAA CCGGATGAAA TTTACAATTT AGGGGCACAA
AGTCACGTGG CAGTAAGCTT TGAGACACCT GAATATACGG CTAATTGTGA TGCATTAGGA
ACATTAAGAA TATTAGAAGC TATAAGAATT TTAGGACTTG AAAATAAAAC AAAAATTTAT
CAAGCAAGTA CTAGTGAGTT ATATGGTGAA GTTCAGGAAA CTCCGCAAAC TGAAAAAACA
CCTTTTTATC CTAGGAGCCC TTATGGGGTG GCCAAAATGT ATGCTTATTG GATAACAGTC
AATTATAGGG AATCTTATGG AATATTTGCT TGTAATGGTA TTTTATTCAA TCATGAGAGT
CCTAGAAGAG GCGAGACTTT CGTAACTAAA AAAATTACTA GAGGTTTAGC AAGGATACAT
TGTGGTTTGG ATGATTGTAT TTATTTAGGT AATCTTGATT CATTAAGAGA TTGGGGTCAC
GCAAAAGACT ACGTCGAGAT GCAATGGTTA ATGTTACAGC AAGATACTCC AGAGGATTTT
GTAATTGCTA CTGGAAGAAG CGAATCCATT AGGCAATTTG TAGAAATTGC AGCTCAAAAG
CTAGGTTGGA GTAAGAACGA AAATTCATCT GCAATAATTT GGGAAGGAGA AGGATTAAAT
GAAGTTGGAA AACGAAAAGA CACAGGAGAA ATTGTTGTAA GAATTGATAA AAGGTATTTT
CGCCCCGCTG AAGTTGAAGC TTTAATAGGA GATTCCTCTA AAGCTAGAAA AGAATTAGGA
TGGGAACCTA AAATCCGCCT TGAAGAAATG ATTGAAGAAA TGATCAAATA TGATTTGGAG
GTATGCAAAG GCTTAGTAAA TTAA
 
Protein sequence
MNFSTDMNDK NIKKIALITG ITGQDGSYLA EFLLNKGYQV HGIKRRSSSL NTSRIDHLYQ 
DPHELNQNFI LHYGDLTDST NLIRIIQDVQ PDEIYNLGAQ SHVAVSFETP EYTANCDALG
TLRILEAIRI LGLENKTKIY QASTSELYGE VQETPQTEKT PFYPRSPYGV AKMYAYWITV
NYRESYGIFA CNGILFNHES PRRGETFVTK KITRGLARIH CGLDDCIYLG NLDSLRDWGH
AKDYVEMQWL MLQQDTPEDF VIATGRSESI RQFVEIAAQK LGWSKNENSS AIIWEGEGLN
EVGKRKDTGE IVVRIDKRYF RPAEVEALIG DSSKARKELG WEPKIRLEEM IEEMIKYDLE
VCKGLVN