Gene PMT9312_1306 details

Gene Information

• Locus tag: PMT9312_1306
• ID: 3766115
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: +
• Start bp: 1213420
• End bp: 1215327
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 637797836
• Product: nucleotide-diphosphate-sugar epimerase, membrane associated
• Protein accession: YP_397801
• Protein GI: 78779689
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1086] Predicted nucleoside-diphosphate sugar epimerases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.238436
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTTT TAAAGAAAAT TATAAAAAGA CTTAGGTTAG ATTCTTTACT TATTCCTAGT 
ATTGATTTTC TTTTAATATA TTTTGCTTGC CAACTAGGAA TACGTTATAG AAATATTTCT 
TATGAAATTA TAAGATCAGA TTTAAGAGGC TTCCCCGATG ATTACGCATG GATATTATGG 
ATTGCACCAT TTTTGGGGGT TTTCATATTC TCTTTATCAA ACCAATACAA ATCATTATTT 
GGTTTATTTA CAACAAAGAA CATATATAAA TTATTTTGGT ATTCTTTATT TTTTCTAATA 
ATTTTAGCTT TTATTGGACA AATATTTTTA TTTAAAATCC CAGATTTTAA AGCTTGGATT 
GTATTATATT TCATTGTTGT TTCTGCTACT TCATTTTCAC GTTTTATATA TAAGGATACT 
TTTCAAAAAA GAATTTCTTT AAAATCTAAA AATGCAAAAT CTATTGCCAT ATATGGAGCT 
GGCGGAGCAG GTAGGCAACT TCAGGCCTCC TTGAGAATAT CTAACCTATA TAACGTCAGT 
TTCTTTATAG ATGACGACTC AAGTTATTGG TACAGAGAAA TCAATGGAAT TAAAATATTT 
CCTCCTGAAT GTTTAAAAGA TAAAGTAAAA AATATTGATC AGATTTTTTT AGCAATTCCA 
TCACTTCCTC CAAAAAAAAG AAAGAAAATT CTAAATTCAT TACAGAAATT TAATATCAAA 
ATCTCTTCCA TACCATCAAT AAAAGAAATA ACAAAGCAGA AATCAATAAT AGATTCTTTA 
AAACCAATTG ATGTTGAGGA TTTACTTGAG AGAGATGCTG TAGATCCTTA CATTCATCTA 
CTATCAAAAG ACATTAAAGG AGCAATAATT TGCATTACTG GAGCAGGAGG TTCTATAGGC 
GGCGAATTAA CAAGGCAAAT AATCGAATTA AATCCAAAGA AAATAATCTT GCTGGACAAT 
TGTGAATCAA ATCTTTACCA AATAACATCA GCGGTTGAAG GCTTGAATTT TCGTAGCATA 
AAAATAACAC CGGCCTTAGG CGATTGTTGT AATTTAGAAT TTCTAAAGAA CCTATTCAGA 
AAAGAAAAAG TTGATATTGT TTTTCATGCA GCAGCATATA AGCATGTTCC ATTGGTAGAA 
ATAAATCCCA TAAATAGTAT AAATAATAAT GTTTTTTCTA CCCTCAATAT ATGTATTGCC 
TCAAAGAAAC TTTCTTTAAA AAAGGTTTTG ATGATCTCAT CAGATAAAGC TGTAAGACCT 
ACAAATATAA TGGGCGCATC TAAAAGACTT TCTGAAATTA TTGTTCAAGC ATTTGCTCAT 
GATGCTGAAA AAAATTCGCT TAATAAAAAA GAAAAAAAAA CATGCTTCTC CATGGTTAGA 
TTTGGAAATG TTCTTAGTTC ATCAGGATCA GCAGTTCCAC TTTTTATTAA GCAAATTTCC 
TCTGGGGGTC CAGTAACTCT TACTCATCCT CAAATAACGC GTTACTTTAT GACGATTAAG 
GAAGCCTCAC AATTAGTTAT TCAATCTTCA GCCATGGCTC AAGGAGGAGA GGTATTCCTA 
TTAGATATGG GTAAATCTAT ATGTATAAAA GATCTTGTTA TTAAATTAAT TAAATTGAGT 
GGACTACAAT TGAGAGATGA TTCAAATCCT AATGGCGATA TAGAAATTAA GATTACTGGA 
TTGAGACCTG GTGAAAAATT ATATGAAGAA TTACTAATTG ATGCTCAGGC AGAAAAGACA 
GACCATCCTT TAATATTTAG AGCGAAAGAA AAATTTATTC CAATGGATGA AATTATCCCA 
AAATTAGAAA ATTTAAAAAA ATTGATTAAC GAAAGAAATA AAGATCAAAT TTTAAAAACC 
CTGAATGAAT TAGTTAAAGA ATGGCAAAAT CAAAATGAAT TAAACTAG 

 

Protein sequence

MEFLKKIIKR LRLDSLLIPS IDFLLIYFAC QLGIRYRNIS YEIIRSDLRG FPDDYAWILW 
IAPFLGVFIF SLSNQYKSLF GLFTTKNIYK LFWYSLFFLI ILAFIGQIFL FKIPDFKAWI 
VLYFIVVSAT SFSRFIYKDT FQKRISLKSK NAKSIAIYGA GGAGRQLQAS LRISNLYNVS 
FFIDDDSSYW YREINGIKIF PPECLKDKVK NIDQIFLAIP SLPPKKRKKI LNSLQKFNIK 
ISSIPSIKEI TKQKSIIDSL KPIDVEDLLE RDAVDPYIHL LSKDIKGAII CITGAGGSIG 
GELTRQIIEL NPKKIILLDN CESNLYQITS AVEGLNFRSI KITPALGDCC NLEFLKNLFR 
KEKVDIVFHA AAYKHVPLVE INPINSINNN VFSTLNICIA SKKLSLKKVL MISSDKAVRP 
TNIMGASKRL SEIIVQAFAH DAEKNSLNKK EKKTCFSMVR FGNVLSSSGS AVPLFIKQIS 
SGGPVTLTHP QITRYFMTIK EASQLVIQSS AMAQGGEVFL LDMGKSICIK DLVIKLIKLS 
GLQLRDDSNP NGDIEIKITG LRPGEKLYEE LLIDAQAEKT DHPLIFRAKE KFIPMDEIIP 
KLENLKKLIN ERNKDQILKT LNELVKEWQN QNELN