Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1292 |
Symbol | |
ID | 3766100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1198352 |
End bp | 1200517 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637797821 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_397787 |
Protein GI | 78779675 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAGGAC AAAATAAGTC GATCACGTTT GACGGACGAG AGATACGACT AACTACAGGA CTATATGCTC CTCAAGCAAA TGGATCAGTA ATGATTGAGT GTGGGGACAC CTCGTTATTA GTTACAGCAA CAAAAACGAC TAAGAAAGAG GTTGCAGACT TTCTACCTCT TATATGCGAC TATGAGGAAA AACTTTATGC TGCAGGGAGG ATTCCAGGTG GTTTTATGAG GAGAGAGGGT CGCCCTCCAG AAAGAGCGAC TTTAATTTCA AGGTTGATTG ATAGGCCAAT GAGGCCGCTT TTCCCTTCAT GGATGCGAGA CGAGATACAA ATAGTTGCTT CATGCCTTTC TTTAGATGAA AGGGTTCCAG CAGATGTTTT AGCTGTTACT GGAGCTTCAA TAGCAACTTT ACTTGGAGAG ATACCATTTC ATGGGCCAAT GGCAGCTGTT AGAGTTGGGC TCATAGGAGA TGATTTCATC TTAAATCCAA GCTATAGAGA GATAGAGAAA GGAGATTTAG ACATTGTTGT TGCAGGATCA CCTGACGGCA TTGTTATGAT TGAAGCAGGT GCTAACCAAT TATCAGAGCA AGATACTATT GAAGCTATAG ATTTTGGTTA TGAGTCAGTA ACTGAACTAA TTAAATCTCA AGTAGATTTA CTAAAAGATT TAGGTATAAA ACAGGTTAAG TCATCGGCTC CCGAAGAAGA TAATACATTG CCCTCTTATT TAGAGAAGAA TTGTACAAAG GGAATTGAGT TGGTTTTAAA GAAATTTGAC CAGTCTAAAG ATGAGAGAGA TCTTGAACTC GAAAAAATAA AAGTTGATAC TCAAGCTAAA ATTGAATCTT TGAAAGATGA TAACGAATTA AAAGTTCTTC TTTCAGAGAA TGATAAGTTG TTAAGTTCCG ACTTCAAAAA ACTTACAAAG AAATTAATGA GGTCCCAAAT CATTAATGAT GGCAAACGAG TTGATGGCCG TGAATTAGAT GAAGTGAGAA AAATTTCAGC ATCTGCTGGG ATACTTCCAA AAAGGGTTCA TGGTTCAGCC TTATTTCAAA GAGGGTTGAC TCAAGTCTTA TCAACGACAA CTTTGGGAAC GCCAAGTGAC GCACAGGAAA TGGACGACCT TAATCCAAGC ACTGAAAAAA CTTATCTGCA TCACTATAAT TTCCCACCTT TTTCAGTTGG GGAAACCAGA CCCATGAGAA CCCCTGGCAG AAGAGAGATT GGCCATGGAG CTTTAGCAGA GAGAGCGATA ATTCCTGTTC TTCCGGGGAA AGAAACATTC CCATATGTAT TAAGGGTTGT TAGCGAAGTT TTAAGTTCGA ACGGATCAAC TTCCATGGGT TCTGTATGTG GAAGTACACT TTCGTTATTA GATGCAGGAG TTCCTTTAAA AGCCCTTGTC AGTGGTACTG CTATGGGTTT AATCAAAGAA GGGAAGGAGA TCAGAATTCT CACGGATATT CAAGGGATCG AGGACTTTCT TGGGGACATG GACTTTAAAG TTGCTGGTAC AGAAAAGGGG ATAACAGCAT TACAAATGGA TATGAAAATT ACAGGTTTGT CCGTTTCCGT TATTTCTGAT GCAATCAAAA AAGCTCGTCC TGCAAGATTA CACATCTTAG AAAAAATGCA AGAGGCAATA GATAAACCTC AAGAATCCTT ATCTCCCCAC GCACCAAGAC TTTTAAGCTT TAGGATTGAT CCAGAGCTCA TTGGGACAGT CATTGGACCT GGTGGAAGAA CCATTAAAGG AATTACCGAA AGAACAAATA CAAAAATCGA TATTGAAGAT GGGGGAATTG TAACCATCGC ATCACATGAT GGCGCTGCGG CTGAAGAAGC GCAGAAGATA ATAGAAGGAT TAACTAGAAA AGTCCACGAA GGTGAAATTT TCACTGGAGT TGTCACTCGA ATAATTCCGA TTGGAGCATT TGTTGAAATT CTCCCTGGTA AGGAGGGAAT GGTTCATATA TCCCAATTAT CTGAAGCGAG AGTTGAAAGG GTGGAAGATG TTGTAAGACA AGGTGATGAA GTAACTGTAA GGGTTCGTGA AATTGATAGC AGAGGTAGGA TCAATCTTAC TTTGAGGGGA GTTTCACAAA ATAGTGGGAT GTCTTATCCT GAGCCAACAC CTACGCCAGT AGCACCTTTA AACTAA
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Protein sequence | MEGQNKSITF DGREIRLTTG LYAPQANGSV MIECGDTSLL VTATKTTKKE VADFLPLICD YEEKLYAAGR IPGGFMRREG RPPERATLIS RLIDRPMRPL FPSWMRDEIQ IVASCLSLDE RVPADVLAVT GASIATLLGE IPFHGPMAAV RVGLIGDDFI LNPSYREIEK GDLDIVVAGS PDGIVMIEAG ANQLSEQDTI EAIDFGYESV TELIKSQVDL LKDLGIKQVK SSAPEEDNTL PSYLEKNCTK GIELVLKKFD QSKDERDLEL EKIKVDTQAK IESLKDDNEL KVLLSENDKL LSSDFKKLTK KLMRSQIIND GKRVDGRELD EVRKISASAG ILPKRVHGSA LFQRGLTQVL STTTLGTPSD AQEMDDLNPS TEKTYLHHYN FPPFSVGETR PMRTPGRREI GHGALAERAI IPVLPGKETF PYVLRVVSEV LSSNGSTSMG SVCGSTLSLL DAGVPLKALV SGTAMGLIKE GKEIRILTDI QGIEDFLGDM DFKVAGTEKG ITALQMDMKI TGLSVSVISD AIKKARPARL HILEKMQEAI DKPQESLSPH APRLLSFRID PELIGTVIGP GGRTIKGITE RTNTKIDIED GGIVTIASHD GAAAEEAQKI IEGLTRKVHE GEIFTGVVTR IIPIGAFVEI LPGKEGMVHI SQLSEARVER VEDVVRQGDE VTVRVREIDS RGRINLTLRG VSQNSGMSYP EPTPTPVAPL N
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