Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1288 |
Symbol | |
ID | 3766096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1193857 |
End bp | 1195323 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637797817 |
Product | ATPase |
Protein accession | YP_397783 |
Protein GI | 78779671 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.478688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCTT GGTGTAGAAA TTTAGAATTA CTTATAAAAT CAAGGGCTTC ATTAATTTGG ATAAGGACTA AAGAAGAGGA AAGATTAGAA AAGCTAGTTA ATTTTTCTTG TGAAAGATTA AATATAAAAA GATTTGTTTG CTGGGATTGT GTTAGCGGTA TTAAAGGATT AATAAATGAA GAAGGGAAAT TTTCTAACAA TCCGTTAGGA GTGCTTAATT GGCTTAAAGA ACAAAGTTCT GAGGTTTCAA CAGTTTTATT AGTTAAAGAT TTTCATAAAT TTTATGATGA TCCATCTATT AATAGAACTA TTAAAGAACT ATCTTCAGCG CTTAAGGAAA CCAGTCATAA TTTAATTATT AGTTCTCATC TATTTCCATC GTCTGAAGAA CTGGATGAAT TAATGACAAT AATAAGCTTA CCTTTACCTG ATCAAAAAGA ATTGAAAAAT CTAATAAAAA AAATTGCTAT TAATACTAAT TCAAATCTTG AGGAAGAAGA CTTAAATGAA CTTTCTATAG CTTCAAGTGG ATTAACCGAA ATAAAAGTAA AGCAAGTCAC TGCTAAGGCT CTTGCTCAAA GAGGAAAAAT TAGTAAAGAG GATATTAAAG ATATTCTTGA AGAGAAAAAA CAAGTTATCG CAAGAAGTGA AATTTTAGAA TTTTTTGAAG CCAAATCAAG TCAAGATGAT ATTGGTGGTT TAAATGTTTT AAAAGTTTGG CTTAAACAAA GATATAGGGC CTTTTCAAAA GAAGCAAGAG ATTATGGACT ACCTATTCCC AAGGGGGTAT TACTTGTTGG AGCACAAGGA ACAGGGAAAT CGCTTACTGC AAAATCAATT TCCAATAGTT GGTCGATGCC GCTTCTTAGG TTAGATGTGG GGAGACTATT TTCTAGCCTA GTTGGTTCAA GCGAGGCAAG GACAAGAGAA ACAATATCAA GAGCTGAGGC CATGTCACCT TGTATCCTTT GGATCGATGA AATTGATAAG GGCTTTGGTG GCGATGCTAG AAGTGATGGA GGGACAAGTC AAAGGGTTTT GGCAAGCTTG CTAACCTGGA TGGCTGAAAA AGAATCCGCA GTATTTGTAA TTGCCACCGC TAATGCTATA GACAAGCTTC CTGCTGAATT ATTAAGGAAA GGTAGATTTG ATGAAATATT TTTTCTTGAT TTGCCAAATT CTGAAGAAAG ATTAAGCATT CTAGATTTGC ACTTAAAAAA AAGAAGACCA AGTTACAGTT TCCCTCTTAC TACCATCATC GACAGAACAG ATGGATTTTC AGGCGCAGAA CTTGAACAAG CAGTAATAGA GGGGATGCAC ATTTCATTCT CAGACAATAG AGAGCTTATG GAGAAAGATT TAGTAAAGGC AGTTTCTGAA TTGGTTCCCT TATCGAGAAC AGCTAAAGAG CAAATTGATT TACTAAAAGA ATGGTCATCT ACAGGGCGGG CTCGTTCTGC ATCTTAA
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Protein sequence | MNSWCRNLEL LIKSRASLIW IRTKEEERLE KLVNFSCERL NIKRFVCWDC VSGIKGLINE EGKFSNNPLG VLNWLKEQSS EVSTVLLVKD FHKFYDDPSI NRTIKELSSA LKETSHNLII SSHLFPSSEE LDELMTIISL PLPDQKELKN LIKKIAINTN SNLEEEDLNE LSIASSGLTE IKVKQVTAKA LAQRGKISKE DIKDILEEKK QVIARSEILE FFEAKSSQDD IGGLNVLKVW LKQRYRAFSK EARDYGLPIP KGVLLVGAQG TGKSLTAKSI SNSWSMPLLR LDVGRLFSSL VGSSEARTRE TISRAEAMSP CILWIDEIDK GFGGDARSDG GTSQRVLASL LTWMAEKESA VFVIATANAI DKLPAELLRK GRFDEIFFLD LPNSEERLSI LDLHLKKRRP SYSFPLTTII DRTDGFSGAE LEQAVIEGMH ISFSDNRELM EKDLVKAVSE LVPLSRTAKE QIDLLKEWSS TGRARSAS
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