Gene PMT9312_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1272 
Symbol 
ID3766080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1182568 
End bp1183092 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content39% 
IMG OID637797801 
Productflavodoxin FldA 
Protein accessionYP_397767 
Protein GI78779655 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.468155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTAG GAATTTATTA CGCAACTACA ACTGGAAAAA CTGAAGACGT AGCTGATCGT 
CTTCATAACT TTATTTCTTC GGCAGAAGCA CCTAAAGATG TATCTGATGT TGATGATCTT
TCAGAATTCG AAGGTCTTGA TGGAATTATC TGCGGGATAC CTACTTGGAA CACTGGGGCT
GATGAAGAAA GATCAGGAAC TGCATGGGAT TCAATTCTGG AGGATATTGG TGAACTAAGT
TTATCAGGAA AAAAGGTTGC AATTTTTGGT TTAGGAGATT CTTCTACCTA CACAGAAAAC
TATTGTGATG CCATGGAAGA ACTTCACAGC TACTTCGCTA AAGCAGGTGC CGAAATGGTC
GGTTACGTAG ATAAATCTTC TTATACGTTT GATGAATCTA AAAGTATCAT TGGAGAAAGC
TTTTGTGGAT TACCTCTTGA TGAGGATAGT GAATCTGATT TAACCGATAC ACGTCTTGAA
ACATGGGCTT CTCAGCTTAA GGACGAAATC CCTTCATTGG CGTAA
 
Protein sequence
MTVGIYYATT TGKTEDVADR LHNFISSAEA PKDVSDVDDL SEFEGLDGII CGIPTWNTGA 
DEERSGTAWD SILEDIGELS LSGKKVAIFG LGDSSTYTEN YCDAMEELHS YFAKAGAEMV
GYVDKSSYTF DESKSIIGES FCGLPLDEDS ESDLTDTRLE TWASQLKDEI PSLA