Gene PMT9312_1264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1264 
Symbol 
ID3766072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1176075 
End bp1177388 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content40% 
IMG OID637797793 
Productporin-like 
Protein accessionYP_397759 
Protein GI78779647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCT TCCAACAAAT GTTGGTGGCA GGGGCATCTT TGAGCTTATT AGCTCCAATT 
GCTGCTCAAG CTTCCGATGT AGTCAATTTA GAAGAAATGA ATAGCTACGG ACGTAGCCAA
AAAAAATCTT CAAAACTTGA CAGTAATACA TTCATTAACG AAGTTAGTGA AGATATTGCA
ACTCTAAACG GCCGTATTGA TGGCCTTGAG TCTAAACAAA ATGATTTTGA AGCAGGCGCT
TTCTCTTCTA CAACATCCAT GGATGGTAAG GCGATCTTTT GGATTGGTGC AATAGAAGGT
ATCAATGATG TTGATGACAA TGAGGATGGT CTCAATACAG ATGAACCATC TGATTCGGTT
CAGACAGGTT ATACCTACAC AATGAACTTA AATACAAGTT TTACAGGTGA TGATAACCTC
TATGTACGTT TAAAAGCTGG AGAAAATGGT GGGGCTTGGT CATCTAAACC AGCTGGTTAC
CATATCCATA CCAAAGATAC AAATGATGAA TTTAGGGTTG ATAAGATTTG GTATACATTC
CCTATAGGAG ATAACATTAC TGCTTTCGCA GGTCCTAGGA TTGAGAACTA CTACATGTAT
GTAACTCCAT CTATTTATAA ACCAGGTGCT TTAAAAGCCT TTAAGTTAGG TGGAAATAGT
AACTTTGGAG CTAGTACCGA CGTTGGTTTT GGTTTAAAAT ATGAAGCCGA TAACGGTTTT
GCTATAGCAT CGAACGTTGT TGATAAAAAC GCTGATGCAG CCAATAGTGG TTTCTTCCAA
GACGATTCAG TTAGCAAATG GGATACTCAA ATTGCATATA CCCAGCCTAG GTATCACTTA
TCTTTAACTG TTTCAAATGC TCAGAACTGG ACATCTCAGC TTTATAATGC AACAGCATTA
GGTGAGAATA CCGCGACAGA TTCGATGGGA TATGCCGCAA GAGCATATTG GATGCCAGAA
GAAACAGGTA CTGCAATGCC TGAAATTTCT GTTGGTTACG ATACAAAGGT CTGGGATGAT
GCTGCTGCCG GAACTGTTGA TGAGGCAGAT AGCTGGATGG TTGGGTTGAC TTGGAAAGAT
ATTCGTCAGC CAGATGACAG AATTGGAATT GCATTTACTC AACCATTAAA GGCTACTTCT
ATTGCTGGCG GAGGTGATAC TAATGAAGTT GATCCACTAT TGTGGGAAGT ATATTATTCA
TGGAAACAAA ATGATTCTGT GACAATAACT CCTGCAATCT TTGGCGGGTC TGATTCTTTC
CAAGCAGATG ATGATACTTT TGGAGCAGTT GTAACAACAG CGTTCAAGTT CTAA
 
Protein sequence
MKLFQQMLVA GASLSLLAPI AAQASDVVNL EEMNSYGRSQ KKSSKLDSNT FINEVSEDIA 
TLNGRIDGLE SKQNDFEAGA FSSTTSMDGK AIFWIGAIEG INDVDDNEDG LNTDEPSDSV
QTGYTYTMNL NTSFTGDDNL YVRLKAGENG GAWSSKPAGY HIHTKDTNDE FRVDKIWYTF
PIGDNITAFA GPRIENYYMY VTPSIYKPGA LKAFKLGGNS NFGASTDVGF GLKYEADNGF
AIASNVVDKN ADAANSGFFQ DDSVSKWDTQ IAYTQPRYHL SLTVSNAQNW TSQLYNATAL
GENTATDSMG YAARAYWMPE ETGTAMPEIS VGYDTKVWDD AAAGTVDEAD SWMVGLTWKD
IRQPDDRIGI AFTQPLKATS IAGGGDTNEV DPLLWEVYYS WKQNDSVTIT PAIFGGSDSF
QADDDTFGAV VTTAFKF