Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1264 |
Symbol | |
ID | 3766072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1176075 |
End bp | 1177388 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637797793 |
Product | porin-like |
Protein accession | YP_397759 |
Protein GI | 78779647 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCT TCCAACAAAT GTTGGTGGCA GGGGCATCTT TGAGCTTATT AGCTCCAATT GCTGCTCAAG CTTCCGATGT AGTCAATTTA GAAGAAATGA ATAGCTACGG ACGTAGCCAA AAAAAATCTT CAAAACTTGA CAGTAATACA TTCATTAACG AAGTTAGTGA AGATATTGCA ACTCTAAACG GCCGTATTGA TGGCCTTGAG TCTAAACAAA ATGATTTTGA AGCAGGCGCT TTCTCTTCTA CAACATCCAT GGATGGTAAG GCGATCTTTT GGATTGGTGC AATAGAAGGT ATCAATGATG TTGATGACAA TGAGGATGGT CTCAATACAG ATGAACCATC TGATTCGGTT CAGACAGGTT ATACCTACAC AATGAACTTA AATACAAGTT TTACAGGTGA TGATAACCTC TATGTACGTT TAAAAGCTGG AGAAAATGGT GGGGCTTGGT CATCTAAACC AGCTGGTTAC CATATCCATA CCAAAGATAC AAATGATGAA TTTAGGGTTG ATAAGATTTG GTATACATTC CCTATAGGAG ATAACATTAC TGCTTTCGCA GGTCCTAGGA TTGAGAACTA CTACATGTAT GTAACTCCAT CTATTTATAA ACCAGGTGCT TTAAAAGCCT TTAAGTTAGG TGGAAATAGT AACTTTGGAG CTAGTACCGA CGTTGGTTTT GGTTTAAAAT ATGAAGCCGA TAACGGTTTT GCTATAGCAT CGAACGTTGT TGATAAAAAC GCTGATGCAG CCAATAGTGG TTTCTTCCAA GACGATTCAG TTAGCAAATG GGATACTCAA ATTGCATATA CCCAGCCTAG GTATCACTTA TCTTTAACTG TTTCAAATGC TCAGAACTGG ACATCTCAGC TTTATAATGC AACAGCATTA GGTGAGAATA CCGCGACAGA TTCGATGGGA TATGCCGCAA GAGCATATTG GATGCCAGAA GAAACAGGTA CTGCAATGCC TGAAATTTCT GTTGGTTACG ATACAAAGGT CTGGGATGAT GCTGCTGCCG GAACTGTTGA TGAGGCAGAT AGCTGGATGG TTGGGTTGAC TTGGAAAGAT ATTCGTCAGC CAGATGACAG AATTGGAATT GCATTTACTC AACCATTAAA GGCTACTTCT ATTGCTGGCG GAGGTGATAC TAATGAAGTT GATCCACTAT TGTGGGAAGT ATATTATTCA TGGAAACAAA ATGATTCTGT GACAATAACT CCTGCAATCT TTGGCGGGTC TGATTCTTTC CAAGCAGATG ATGATACTTT TGGAGCAGTT GTAACAACAG CGTTCAAGTT CTAA
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Protein sequence | MKLFQQMLVA GASLSLLAPI AAQASDVVNL EEMNSYGRSQ KKSSKLDSNT FINEVSEDIA TLNGRIDGLE SKQNDFEAGA FSSTTSMDGK AIFWIGAIEG INDVDDNEDG LNTDEPSDSV QTGYTYTMNL NTSFTGDDNL YVRLKAGENG GAWSSKPAGY HIHTKDTNDE FRVDKIWYTF PIGDNITAFA GPRIENYYMY VTPSIYKPGA LKAFKLGGNS NFGASTDVGF GLKYEADNGF AIASNVVDKN ADAANSGFFQ DDSVSKWDTQ IAYTQPRYHL SLTVSNAQNW TSQLYNATAL GENTATDSMG YAARAYWMPE ETGTAMPEIS VGYDTKVWDD AAAGTVDEAD SWMVGLTWKD IRQPDDRIGI AFTQPLKATS IAGGGDTNEV DPLLWEVYYS WKQNDSVTIT PAIFGGSDSF QADDDTFGAV VTTAFKF
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