| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1250 |
|---|
| Symbol | |
|---|
| ID | 3766057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 1163753 |
|---|
| End bp | 1164715 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637797778 |
|---|
| Product | putative chaperon-like protein for quinone binding in photosystem II |
|---|
| Protein accession | YP_397745 |
|---|
| Protein GI | 78779633 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.263784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTC TTTTAGTAGG GGCAACAGGG ACTCTTGGAA GGCAAATAGC AAAGAAGGCT
ATAGAAGATG GACATGAAGT GAGATGTTTT GTTAGAAACC CAAAAAAATC TTCTTTTCTA
CAGGAGTGGG GTTGTGAACT AACAAAAGGT AATTTATTAA ATTCTTCTGA TATTAAATAT
GCATTGCAAG ATATTGAAGT TGTTATTGAT GCGGCAACCA GTAGACCAGA TGACCCTAAA
AGTATTTATG AAATAGATTG GGATGGAAAA CTCAATTTAT TCAATGCTTG TGAGGCCTTA
AATGTAAAAA GAGTAATATT TCTTTCAATA CTTCTAACAG AAAAATTTAG AAATGTTCCA
TTAATGGACA TTAAATACTG TACTGAAAAA CTTCTTGAGA AATCCGATCT AGAATATACA
ATCTTCAAAT GTGCAGCTTT TATGCAAGGA GTTATAGGTC AATTCGCTAT ACCCATTTTA
GATAGTCAAG CAGTATGGAT GAGTGGAACT CCAACGAAAA TTGCCTATAT GAATACTCAA
GACATGGCAA AAGTTATTGT TGCAGCAGTT AATAATCCAA AAACTCATAG AAAATCAATG
CCATTAGTTG GTCCTAAAGC ATGGGATTCA AACGAAGTTA TATCCCTATG TGAAAAATTT
AGCGAAAAGA AGGCTAAAAT TTTTAGAGTT TCCCCCTTCC TTATTAGTAT TACTCAAAAA
GTGGTTTCTT TTTTTCAGGA CTCTTTAAAT GTTGCTGAAA GATTGGCTTT TGCTGAAGTG
ACAAGTAGTG GAGAATCATT AGATGCCGAC ATGAGCAGAA CCTACGAAAT ATTGGATCTA
AAAAAAGAAG ATATGACATC TTTAGAAAGT TATATCAAAG AGTACTATCA ACAAATACTT
AAAAGATTAA AGGAAATGGA AGCAGATCTA AATATTGAAG AAAAAAAGAG ATTACCTTTC
TAA
|
|---|
| Protein sequence | MKILLVGATG TLGRQIAKKA IEDGHEVRCF VRNPKKSSFL QEWGCELTKG NLLNSSDIKY
ALQDIEVVID AATSRPDDPK SIYEIDWDGK LNLFNACEAL NVKRVIFLSI LLTEKFRNVP
LMDIKYCTEK LLEKSDLEYT IFKCAAFMQG VIGQFAIPIL DSQAVWMSGT PTKIAYMNTQ
DMAKVIVAAV NNPKTHRKSM PLVGPKAWDS NEVISLCEKF SEKKAKIFRV SPFLISITQK
VVSFFQDSLN VAERLAFAEV TSSGESLDAD MSRTYEILDL KKEDMTSLES YIKEYYQQIL
KRLKEMEADL NIEEKKRLPF
|
|---|
| |