| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1238 |
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| Symbol | |
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| ID | 3766045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 1153915 |
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| End bp | 1155141 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637797766 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_397733 |
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| Protein GI | 78779621 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.191618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAATACA TTACTGTTCT CGGTTCTACT GGTTCAATAG GGACTCAGAC TCTCGAAATA
GCTAGTGAGC AGCCTGATAA GTTTAAAGCC GTAGCTCTTT CGGCAGGACG AAATATTACT
TTATTAACTG AACAAGTTAA AACACATAAA CCAGAAGTAG TTGCAATTGA GGATGAAAAT
CTTATAGAAG ATTTAAAAGA TAATATTAAT AACTTAGATT TGGATAGTGC TCCCTTGGTT
TTGGGTGGAA AGGAGGGGAT TAACGCAGTT GCAGCTTGGG ATAAGGCAGA TACAGTTATA
ACCGGGATAG TAGGATGTGC AGGCTTAATT CCAACAATGT CAGCAATTAA TGCGGGGAAA
AATATTGCCC TTGCTAACAA AGAAACTTTA ATTGCAGCAG GGCCAATTGT TATTCCTGCA
TTAAAGAAAA ATAATAGTAG GCTTTTACCT GCTGATTCAG AACACTCTGC TATCTTTCAA
TGCTTACAAG GATTACCTAA TTATGAAAAT GCAGATTTTT CAACAGGAGT GATGCCTAAG
GGTTTAAAAG CCATACATTT AACAGCTTCT GGTGGTGCTT TCAGAGATTG GCCCGTTGAG
AATTTAAAGC ATGTCACAGT GGAAGATGCG ACTTCACATC CTAATTGGGA TATGGGAAAA
AAAATAACTG TAGATTCTGC AACTCTTATG AATAAAGGAT TAGAAGTTAT AGAAGCTCAT
TATTTATTTG GGACCTCTTA CGAAAATATC GAAATAGTTA TTCACCCTCA AAGTATTATT
CATTCAATGA TTGAGATGGA AGATTCTTCA GTATTAGCTC AATTAGGTTG GCCAGATATG
AAGCTACCTA TTTTATATGC GATGAGTTGG CCTGAAAGGT TTAAAACAAA TTGGAAAAGA
TTAAACCTAA GTGAAATTGG AAAATTAACT TTTAAAGAGC CAGACGAGTT TAAATATCCA
TGCATGGGAC TTGCTTATGC CGCAGGAAAA TCTTCAGGGA CTATGCCTGC AGTCTTAAAT
GCTGCTAACG AAATGGCTGT TGAACAATTC CTTAAAGAAA AAATTTCTTT TCAAGAAATT
CCAACATTTA TAAGTAAAGC TTGTGAATCA CATATGGAGA ATTTGAATTT GAGTCCCGAA
TTGGAGGATA TTCTTGAAGT GGATAATTGG GCCAGAATTT TCGTTAAGCA AGAAATAAAA
AAAGGGAAAA AATACGTAAG TATTTGA
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| Protein sequence | MKYITVLGST GSIGTQTLEI ASEQPDKFKA VALSAGRNIT LLTEQVKTHK PEVVAIEDEN
LIEDLKDNIN NLDLDSAPLV LGGKEGINAV AAWDKADTVI TGIVGCAGLI PTMSAINAGK
NIALANKETL IAAGPIVIPA LKKNNSRLLP ADSEHSAIFQ CLQGLPNYEN ADFSTGVMPK
GLKAIHLTAS GGAFRDWPVE NLKHVTVEDA TSHPNWDMGK KITVDSATLM NKGLEVIEAH
YLFGTSYENI EIVIHPQSII HSMIEMEDSS VLAQLGWPDM KLPILYAMSW PERFKTNWKR
LNLSEIGKLT FKEPDEFKYP CMGLAYAAGK SSGTMPAVLN AANEMAVEQF LKEKISFQEI
PTFISKACES HMENLNLSPE LEDILEVDNW ARIFVKQEIK KGKKYVSI
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