| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1199 |
|---|
| Symbol | |
|---|
| ID | 3766006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 1120689 |
|---|
| End bp | 1121354 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637797727 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_397694 |
|---|
| Protein GI | 78779582 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.789092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT TATTAAAAGA AAACAAAATT TCTAAAACCA TTTCCTTCTT TAGTCCAGTT
ATTAGAAAAG AGAAGGTTTT AAAAAATGTT ATTAAAAAGT CCTTAAATGA TGAAGGATTC
ACTTTAGTAG AACTAATTGT TGTAGTTATG ATGATTGGAA TTCTTTCATC TATAGCTATT
CCTCAATTCA TGTCTGCTGC TGACAAGGCA AAGCAAAAAG AGGCATCAGC TATTGTTGCA
TCATTAGTAA AGTCGGCCAC GGCATATAAT ACAGAATATG GGGCTCTCCC AAGAGATATG
GGTGAATTAA GCGAATATGC AATGTTTCAA AGATGTGATC ATAATGATGT GGCATCCGAA
GGTGGATCAG TATGTAAAGG AAGCACGCCT AAAAAAGTTC CAGAAAATGT TACTCAATTC
TTTTCAACTT CTGGTCACTA CAATATAAAT CTTAGGAGAA CAAATGGTAA TTCTGTTTTT
AAAGTTCGCG CATTACCTAA TGGAGGAGCT TATGCCCAAA ATGGCAGTGG TGTAACAGGT
TGTTATAATC CTGCTCAGGG GGTTTCTCAA GTTAAAGAAA TGACTTCTAA ATCAACTGGT
AAAGGAGTTG GTAATGTACC AGATTGGCCC GCGATTCAAT GCGGTACAGG TTCTGATGGA
GCGTAA
|
|---|
| Protein sequence | MKNLLKENKI SKTISFFSPV IRKEKVLKNV IKKSLNDEGF TLVELIVVVM MIGILSSIAI
PQFMSAADKA KQKEASAIVA SLVKSATAYN TEYGALPRDM GELSEYAMFQ RCDHNDVASE
GGSVCKGSTP KKVPENVTQF FSTSGHYNIN LRRTNGNSVF KVRALPNGGA YAQNGSGVTG
CYNPAQGVSQ VKEMTSKSTG KGVGNVPDWP AIQCGTGSDG A
|
|---|
| |