| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1186 |
|---|
| Symbol | |
|---|
| ID | 3765993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 1105215 |
|---|
| End bp | 1106063 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 637797714 |
|---|
| Product | leader peptidase (prepilin peptidase) / N-methyltransferase |
|---|
| Protein accession | YP_397681 |
|---|
| Protein GI | 78779569 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.262365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATA TTAAATTAAA TAATAATTTA GTAATGCTTT ATTCCAAAAT ATTATTTAGT
TGCACTTCAA TATTTTTTGG ACTTATATTT GGGAGTTTTC TAAATGTAGT AATTTATAGG
CTTCCAAATA ATCAGTCAAT CCTTACACCT AGAAGTTTTT GTCCTAAATG CAATAAAAAA
TTAAGCTGGC ATGAAAATAT ACCAATCTAT AGTTGGATAA AACTCAAAGG AAAATGTTCT
AATTGTGATA AAGCAATTTC TACTAAATAT CCATTGACAG AATTAGCAAC TGGCATGTTA
TTTCTTTTTA GTTTTAACGC TATCCCTAAA GATATATATT TTGAAAATTT TGCTTTTAAT
CTTTTTTTTA GTTGGGCACT TATTTTAATC TTATTATCAA TTTCAATTAT TGATTATGAA
TTTCTTTGGA TTCCTAATTC AATAATAATG ATTGGATTTT TATTTGGGTT GGCATCATCA
ATATTTTCTG CAATAGTAAA TGATCAAAAT ATAGTAATTC AATTATTTGT AAATTTAATT
TCGGGCATTT TAGGTTTTTT AATAATAATT TTGATAATGA AATCCGGTGA ACTAGTTTTC
AAAAAACCAT CAATGGGTTT AGGAGATGCT AAGTTAGCTG GAATGATAGG TTTTTGGATT
GGTTTACCTG GAGTAATTAT TTCAATCTGG TTATCTTTCA TAATCTCTGG GCTATTTGTT
ATTTTGGGAT TAGCAACAAA AAAAATTAAG AAAGGACAAT TAATACCTTT TGGTCCATTT
TTATCTATTA GTGGATTTTT AATTTGGTTA TTTGGTGAGG ATATTTTTCT TAAAATTATT
TTTCAATAA
|
|---|
| Protein sequence | MINIKLNNNL VMLYSKILFS CTSIFFGLIF GSFLNVVIYR LPNNQSILTP RSFCPKCNKK
LSWHENIPIY SWIKLKGKCS NCDKAISTKY PLTELATGML FLFSFNAIPK DIYFENFAFN
LFFSWALILI LLSISIIDYE FLWIPNSIIM IGFLFGLASS IFSAIVNDQN IVIQLFVNLI
SGILGFLIII LIMKSGELVF KKPSMGLGDA KLAGMIGFWI GLPGVIISIW LSFIISGLFV
ILGLATKKIK KGQLIPFGPF LSISGFLIWL FGEDIFLKII FQ
|
|---|
| |