Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1179 |
Symbol | |
ID | 3765986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1093815 |
End bp | 1094933 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637797707 |
Product | adhesin-like protein |
Protein accession | YP_397674 |
Protein GI | 78779562 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00551453 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATAT CTCAAGCTCT AACTTCAATA ACTTTAGTTT TTGGATCAAT TTTGTCTGTT TCTGCTAACG AATACAAATT TGAAGAAATC AAATTTAATC AAATTCCTAA TGAACAAAAT AATTATGAGC CTAAAGACAA ATTAGATGAA TACATAATCA AAGGGGCAAA TTATTCAACC AAATTTGTTC CATTAATGAA TAACGGGGCA AAGGGTGATG AATATACTGG CATAATGGCA GATGATCTTA ATAGATTATT AGTTGACGCT GGATTTGATT TTGCAAATGC AAAGGCAAAT GGTGAGATAC AAAAAATCCC ATTTTTTGCT CAGACATCTG TAAATATTTC TGGTGGGACA GAATCAGATA CCAGCTTCTC AATAAATAGT TTGATGAAGC TAGGCGAGCT TGCAAAAGAT GATCAGGGTG ATTTAAAAAC TCTTGCTTTC TCTCAAGCAA GATTTGCCAC TGCTACAAAT GCAGAAGGTT CCACTATTAA TATTGGTTTA GGAATTAGAA ATCGTCCCGA TGATATTTCT ATGGTTGGAG CTAATGCATT CTGGGATTAC AGAATGACAG ATTACAGTGA TGCACATAGC AGACTTGGAT TAGGTGGAGA ATATTTCTGG AAGGATTTTG AATTTAGAAA TAACTGGTAT ATGGCAATTA CTAATGAAAA GGACGTAATT ATAAAAGGTG TTGATTACCA AGAGAGGGTA GTACCAGGAT GGGATTTAGA AGTAGGTTAC AGACTTCCAA ATAATCCAGA ACTTGCTTTT TATATTAGAG GATTTAACTG GGATTACAAA TATACTCAAG ACAATTCTGG ATTAGAAGGA GCGGTTAGTT GGCAAGCTAC TCCGCACGTT GGTTTAGAAG CTTATGTTTC TAATGAAATA TCCGCAGCAT CAACAACAGC TAATACTGAC CTACCGGGTA CGGACGAAAA CTTTTTTGGT TTAAGAATGA ACATAACAGG CAATCCAGTC AAATTTGAGA AATCAAATTA CAAGAAAAAC ATGGTTACTC AAATGACTCA ACCAGTAAAA CGTAAGTATG ATGTTCTGCT AGAAAGATCA GCAGGTGGGG TTTTCCAGAA TAGGGCTAAA GGAGTTTAA
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Protein sequence | MKISQALTSI TLVFGSILSV SANEYKFEEI KFNQIPNEQN NYEPKDKLDE YIIKGANYST KFVPLMNNGA KGDEYTGIMA DDLNRLLVDA GFDFANAKAN GEIQKIPFFA QTSVNISGGT ESDTSFSINS LMKLGELAKD DQGDLKTLAF SQARFATATN AEGSTINIGL GIRNRPDDIS MVGANAFWDY RMTDYSDAHS RLGLGGEYFW KDFEFRNNWY MAITNEKDVI IKGVDYQERV VPGWDLEVGY RLPNNPELAF YIRGFNWDYK YTQDNSGLEG AVSWQATPHV GLEAYVSNEI SAASTTANTD LPGTDENFFG LRMNITGNPV KFEKSNYKKN MVTQMTQPVK RKYDVLLERS AGGVFQNRAK GV
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