| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1168 |
|---|
| Symbol | |
|---|
| ID | 3765975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 1081893 |
|---|
| End bp | 1082942 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637797696 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_397663 |
|---|
| Protein GI | 78779551 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATA GATTATTCTT TGGAATTGCC GCTTTTGGTC TGCTTTTAAC TGGTTGTGCT
AGTAATCAAA ACGATAATAT TTCTAGGCTA TCCCTAATAC AAGAAAGAGA TGAATTAATT
TGCGGGGTAA GTGGAAAAAT TCCAGGTTTT AGCTTTATTG AAAGAGACGG AAGTTATAAA
GGATTAGACG TAGATATATG TAAAGCCTTT GCTGCAGCAA TAATAGGAGA TTCAGAAAAA
ATTCAGTTTA GACCTCTAAC TGCTGCTGAA AGATTTTTAG CTATTAAAAC AGGAGATATT
GATTTGTTAT CAAGGAACAC TACTTTAACT CTTAGTAGAG ATTCTTTTGG AGGTAATGGG
TTAACTTTCG CTCCTGTAGT TTTTCATGAT GGGCAAGGGT TAATGGTTAA AAAAAATAGT
GGTATTGAAA GTATTCAAGA ACTCGCTAAT AAGTCTATAT GTGTAGGTTC AGGAACAACT
ACTGAGCAAA ATATTAATGA CACTTTTGAA AGTCTCTCGC TCCCTTATGT CCCAATTAAA
TATCAAGATC TTAATCAGGT AGTAGCAGGA TATCTACAAG GTAGATGTCA AGCGATGACC
TCTGATCGAT CTCAATTAGC AGCAGCTAGA TCAGGTTTTA AGAATGCAAA AGATCATATT
ATCCTTGATG ATGTTTTAAG TAAGGAGCCT TTAGCACCTG CATCAGATGG GTCTGAACAG
AAACTTGCCG ATGCTATGAG ATGGACAGTT TTTGCTTTGA TTGCTGCTGA AGAGCAAGGT
ATAACCCAAT CAAATATTGC TGATAGGCTC CAGCTCGCAA AAAATAATCC ACAATTAAAA
TCATTAAGAA GATTTCTTGG GGTTGATGGA GGCTTAGGAG AAAAAATCGG ATTAAGAAAT
GACTTCGTAG TTAATGTTAT AAAAGCTACT GGAAATTATG GTGAAATTTA TGATAGAAAT
CTTGGGATAG ATAGCGATGT ACCTATTCCA AGAGGATTGA ATGAAATTTA CAGTAAAGGT
GGTTTACATA TCTCTCCACC ATTTAATTGA
|
|---|
| Protein sequence | MMNRLFFGIA AFGLLLTGCA SNQNDNISRL SLIQERDELI CGVSGKIPGF SFIERDGSYK
GLDVDICKAF AAAIIGDSEK IQFRPLTAAE RFLAIKTGDI DLLSRNTTLT LSRDSFGGNG
LTFAPVVFHD GQGLMVKKNS GIESIQELAN KSICVGSGTT TEQNINDTFE SLSLPYVPIK
YQDLNQVVAG YLQGRCQAMT SDRSQLAAAR SGFKNAKDHI ILDDVLSKEP LAPASDGSEQ
KLADAMRWTV FALIAAEEQG ITQSNIADRL QLAKNNPQLK SLRRFLGVDG GLGEKIGLRN
DFVVNVIKAT GNYGEIYDRN LGIDSDVPIP RGLNEIYSKG GLHISPPFN
|
|---|
| |