Gene PMT9312_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1166 
Symbol 
ID3765973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp1079941 
End bp1080972 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content29% 
IMG OID637797694 
Productamino acid ABC transporter permease 
Protein accessionYP_397661 
Protein GI78779549 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA TAAATCCAAA TTTAAATACA AATTTATTTA AAAAAATTAA AAATTCTTTA 
TTAGCAAAAT CAAAATATAA TTTCTGCAAT TTTATATTTT TTCTGATTTC AATTTCATTA 
ATTTTAAAAA TTTTAACTTC GATTTTTATA AATTCAAATT GGGAAGTCGT AACATCAAAT 
CTTAATTTAT ATGCATTTGG GAGCTTTCCA ATCGATCAGC AATGGAGACC TACTCTTTGG 
TTCTTCAGTC TTTTATCTAT TACATTTATT ACAGTTTATG GGCCTAAATG GAAATGGCTT 
CGTAAAAATT TAATTTTTGG ATGGATTGGA ACAGTACCAT TAGGAATTTA TTTGCTAAGT 
GGTGGTTTGG GTTTAAATCC AGTAATGACA CGTCATTGGG GTGGATTAAC CCTAACAATT 
CTTATAACTT CTTGTAGTAT TCTTTTTTCT TTACCAATTG GTATTTTATT AGCTCTTTGC 
AGAAGAAGTT CAATATTTTT AATTCAGAAA TCAAGTTCTC TTTATATTGA TGTAATGAGA 
GCTGTTCCTC TTATTTCTGT ACTTTTTTTT GGACAATTGT TAATACCTTT ATTTCTACCT 
GTAGGTTTAG AAATAGATCG TGTCTGGAGG GCTGTAATAG CTTTTACTTT TTTTGTCTCA 
GCATATATAG CTGAAGATAT TAAAGGAGGA TTACAGTCGA TACCTAAAAA TCAAATAGAA 
GCTGCTAAAA GTCTTGGCTT AAACAAATAT CAAATCAATA TATACATTCT TATTCCACAA 
GCCTTAAGAG TTGCATTGCC GGCTATTACA AACCAGTTAA TTGGGCTTTT TCAAAATACA 
TCTTTAATGG CTATCTTAGG TTTGATGGAA TTACTTGGTG TAAGCAGGAG TATTCTTGCT 
AATCCAGAAT TCATAGGACA ATATATTGAA GTATATATTT GGTTGGCTTC CGTCTATTGG 
CTTTTTTGCA CAATTATGGC ATTTGTTTCA AAAAAACTTG AGCAAAAAAT GACAATTAAT 
AAAGGATATT AA
 
Protein sequence
MNNINPNLNT NLFKKIKNSL LAKSKYNFCN FIFFLISISL ILKILTSIFI NSNWEVVTSN 
LNLYAFGSFP IDQQWRPTLW FFSLLSITFI TVYGPKWKWL RKNLIFGWIG TVPLGIYLLS 
GGLGLNPVMT RHWGGLTLTI LITSCSILFS LPIGILLALC RRSSIFLIQK SSSLYIDVMR 
AVPLISVLFF GQLLIPLFLP VGLEIDRVWR AVIAFTFFVS AYIAEDIKGG LQSIPKNQIE 
AAKSLGLNKY QINIYILIPQ ALRVALPAIT NQLIGLFQNT SLMAILGLME LLGVSRSILA 
NPEFIGQYIE VYIWLASVYW LFCTIMAFVS KKLEQKMTIN KGY