| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1112 |
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| Symbol | |
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| ID | 3765916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1024361 |
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| End bp | 1026142 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 637797637 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_397607 |
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| Protein GI | 78779495 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.446454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTAA AAAAAGATGG CAACTCAGTT GATAATGGGC AGGAAAAATC TCAGCATGAT
GACGCGTCCC TTCTCGAGAT AAAGAACTTA GAAAACAAAA CAGATATTAA ATCTCAACCA
TTGGAAATAT CAATAGGAAA TGATAATGAG AATGGGTTTC TCGATTTTGG GTTTAATCAA
TCGATCTTAA ATTCGTTAAG CAATAAAGGA TATAAAAATC CAACTCCTAT CCAAAAAGCT
GCAATTCCGG AACTAATGTT AGGCAGAGAT TTATTAGGCC AAGCTCAAAC TGGAACAGGA
AAGACTGCAG CTTTCGCATT ACCATTAATA GAAAAACTTG CAGATAATAA AGAATTAAAT
GCCAAGGTTT TAGTTATGAC CCCTACTAGA GAGTTGGCAA CTCAAGTTGC AGAATCTTTT
AAAAGTTATA GTTCTGAATC TACTAATTTT AAGACAATTG CAATATATGG AGGCACCGAC
TATCGAAATC AAATTTATGC GTTAAAAAGA AAAGTTGACG TAGTAGTTGG AACCCCTGGC
CGAATAATGG ATCATATAAG GCAGGGAACC TTTAAAGTTA ATAGCATAAA TTGTCTTGTT
TTAGATGAGG CCGATGAAAT GTTAAATATG GGTTTTCTTG AAGATATTGA ATGGATAATA
GATCAACTAC CTAAAAATAA GCAGATGGTA TTGTTTTCAG CAACAATGCC TAATGAGATT
AGAAACATAG CAAAAAAATA TCTAAATGAT CCCGCCGAAA TATTAATCAA AAGTGTCAAA
AAAGAAACCC AATTAATTTC GCAAAAATTT CTTTACGTCC AAAGGCATCA TAAATTAGAT
GCTTTAAAAA GAATATTAGA ACTTAATAAC GAGGGAGTAA TAATTTTTGT AAGGACAAAA
CTACTTACTA CTTCAATAGC AGAAGCTTTA GAAAATTTAG GTCATAGTGT GGCAGTGCTT
AATGGAGATA TTCCTCAAAA TCAAAGAGAA AATACTGTAG ATAGATTAAA AAAAGGATTT
ATTGATATTC TTGTTGCAAC TGATGTTGCA GCTAGAGGAT TAGATGTAGA GAGGATAAAA
CTAGTTGTTA ATTACGATTT TCCTTTTGAT AAGGAAACAT ATACTCATAG AATTGGAAGG
ACTGGAAGGG CAGGCAGATC CGGAGAGGCA ATTTTATTCG TTAATCATAG AGAAAAACAT
TTTCTAAGAA ACTTAGAAAA CTCAACAAGA ACTAAGATTG AAGAAATTAA TATACCAAGC
AATAAAATAA TAAATGAAAA AAGGATGGAG AAACTTATAG AGAACGTTAA TGAGAGTTCT
TTAGCTAAAG AAGATAATGA AGAAAATAAA GCTTTGATTA TTGATGTACT AGATAATTTA
AAAGAAAAAC ACTCTATGGA TGACTCAAAT ATTGCAATGG CTGCGATTAA TTTAGTAATA
GGTAATAAAG CATTTTTTGT TAATGAAGAT GATTCTTGGA TTCATAAACA AAATAATACT
GATAGAAATA GATCAAATAG AAATGGTAAT AATCGTATGA GAAATTCAAA TAGAAGAAAT
AATTTTCAAA ATGATTCTTT TGAAACCTAC AAATTTGACT TTGGTAAATT TGATGGTGTT
AGAGTAGCAA ATATTATATC CTCAATCTGT AATTCAACTA ATATAAATGG TAGATCCATA
GGTAAGATAC AGATTTTTAA TGATTATAGT TTGGTTGATT TACCTAGAGA TCTGCATAGA
GAAACTAAAA ATAAATTAAA AAAAATTAAA GTAAGAAACT AA
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| Protein sequence | MALKKDGNSV DNGQEKSQHD DASLLEIKNL ENKTDIKSQP LEISIGNDNE NGFLDFGFNQ
SILNSLSNKG YKNPTPIQKA AIPELMLGRD LLGQAQTGTG KTAAFALPLI EKLADNKELN
AKVLVMTPTR ELATQVAESF KSYSSESTNF KTIAIYGGTD YRNQIYALKR KVDVVVGTPG
RIMDHIRQGT FKVNSINCLV LDEADEMLNM GFLEDIEWII DQLPKNKQMV LFSATMPNEI
RNIAKKYLND PAEILIKSVK KETQLISQKF LYVQRHHKLD ALKRILELNN EGVIIFVRTK
LLTTSIAEAL ENLGHSVAVL NGDIPQNQRE NTVDRLKKGF IDILVATDVA ARGLDVERIK
LVVNYDFPFD KETYTHRIGR TGRAGRSGEA ILFVNHREKH FLRNLENSTR TKIEEINIPS
NKIINEKRME KLIENVNESS LAKEDNEENK ALIIDVLDNL KEKHSMDDSN IAMAAINLVI
GNKAFFVNED DSWIHKQNNT DRNRSNRNGN NRMRNSNRRN NFQNDSFETY KFDFGKFDGV
RVANIISSIC NSTNINGRSI GKIQIFNDYS LVDLPRDLHR ETKNKLKKIK VRN
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