Gene PMT9312_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1101 
Symbol 
ID3765905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1014533 
End bp1015906 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content32% 
IMG OID637797626 
Productdiaminopimelate decarboxylase 
Protein accessionYP_397596 
Protein GI78779484 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA AAAAATCCTT TTTAAAAAAA AAGATTGACC TCAAAAGTCC TAATAAAAAT 
ATTGTACCTA TTACTACAAC CATTGGAAAT GATGGGAAGT TATCAGTTGG TGGATGTTCT
ATTGAAGAAT TAGTTAAAAA ATATGATTCT CCTCTTTATA TATTGGATGA AATCACTTTA
AGAAACTCAT GTAGAGCTTA CAAAAATGCC TTGGAAAAAT ATTACCCAGG GAAATCTCTG
CCAATATATG CCTCGAAGGC AAATAGTTCT ATCTTTATGA GTAACCTTGT TTCCTCAGAA
GGATTAGGAC TTGATGCGGT TTCAGAAGGA GAACTATTAA CTGCTCTTAA AGGTGGGGTA
CCAAATGAAA AAATTGTTTT TCATGGTAAC AATAAATCAG ACAAAGAGAT AGAGTTTGCA
GTTAGAAATA ATATTCAAGT AATTGTAGAT AATGATTATG ACTTAGAAAG ATTAGAGGGC
ATTTCAAATT CATTTAATCG TGATTTAGAA ATAATGATTC GCTTTACTCC CGGAATAGAA
TGCCATACAC ATGAATACAT AAGAACGGGA TCATTTGATA GCAAATTTGG TTTCGGAATT
GAATATTTAA ATATTTTATT TGACAGAATC AATAATACAA AACATTTAAA ATTAAAAGGA
TTACATGCTC ATATTGGTTC CCAGATTTTT GAATTAGACC CACACAAGGA TCTGGGAGAA
ATAATGGTAA ATGTTATTTT AGATGCCAAA AAATTTGGCC ATAATATTCA AAAATTGAAT
CTAGGTGGAG GTTTAGGTAT TAAATATACA GAGAATGACG ATCCTCCTTC AATTGATGAA
TGGGTAAAAA CAATTTCCAC ATCCGTTGTT AAAGCTTGTA AAAAACACAA TTTAGATTTA
CCTACATTGA TGTGTGAGCC TGGAAGATCT ATCGTATCTA CAGCAGGAAT AACAATTTAC
AAAATAGGTG CCTTTAAAGA AATCCCCGGG ATCAGAACGT ATTTGTCAGT TGATGGTGGC
ATGAGTGACA ATCCAAGACC AATAACATAT CAATCGAATT ATTCTGCATG TTTGGTAAGT
AATCCCTTTA ATATTAATTC CAAAAATAAA TATACTATTG CTGGCAAGCA CTGCGAATCA
GGAGATGTAT TGTTTAAGGA AATAGAACTA GCAGATTGCA AAACAGGAGA TCTTATATGT
GTTTTTGGTA CTGGTGCATA CAATAATTCA ATGAGTTCTA ACTACAACAG AATTCCAAGA
CCTGCCGCTC TCTTAGTTTG TAATGGTGAA GCAGAAATCA TTCAAAAAAG AGAAAGTCCA
TTTGATCTTT TAAAATATGA TGTCTTGCCT GATCGCTTTC TCAAACAAAA TTAG
 
Protein sequence
MEEKKSFLKK KIDLKSPNKN IVPITTTIGN DGKLSVGGCS IEELVKKYDS PLYILDEITL 
RNSCRAYKNA LEKYYPGKSL PIYASKANSS IFMSNLVSSE GLGLDAVSEG ELLTALKGGV
PNEKIVFHGN NKSDKEIEFA VRNNIQVIVD NDYDLERLEG ISNSFNRDLE IMIRFTPGIE
CHTHEYIRTG SFDSKFGFGI EYLNILFDRI NNTKHLKLKG LHAHIGSQIF ELDPHKDLGE
IMVNVILDAK KFGHNIQKLN LGGGLGIKYT ENDDPPSIDE WVKTISTSVV KACKKHNLDL
PTLMCEPGRS IVSTAGITIY KIGAFKEIPG IRTYLSVDGG MSDNPRPITY QSNYSACLVS
NPFNINSKNK YTIAGKHCES GDVLFKEIEL ADCKTGDLIC VFGTGAYNNS MSSNYNRIPR
PAALLVCNGE AEIIQKRESP FDLLKYDVLP DRFLKQN