Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1101 |
Symbol | |
ID | 3765905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1014533 |
End bp | 1015906 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637797626 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_397596 |
Protein GI | 78779484 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAA AAAAATCCTT TTTAAAAAAA AAGATTGACC TCAAAAGTCC TAATAAAAAT ATTGTACCTA TTACTACAAC CATTGGAAAT GATGGGAAGT TATCAGTTGG TGGATGTTCT ATTGAAGAAT TAGTTAAAAA ATATGATTCT CCTCTTTATA TATTGGATGA AATCACTTTA AGAAACTCAT GTAGAGCTTA CAAAAATGCC TTGGAAAAAT ATTACCCAGG GAAATCTCTG CCAATATATG CCTCGAAGGC AAATAGTTCT ATCTTTATGA GTAACCTTGT TTCCTCAGAA GGATTAGGAC TTGATGCGGT TTCAGAAGGA GAACTATTAA CTGCTCTTAA AGGTGGGGTA CCAAATGAAA AAATTGTTTT TCATGGTAAC AATAAATCAG ACAAAGAGAT AGAGTTTGCA GTTAGAAATA ATATTCAAGT AATTGTAGAT AATGATTATG ACTTAGAAAG ATTAGAGGGC ATTTCAAATT CATTTAATCG TGATTTAGAA ATAATGATTC GCTTTACTCC CGGAATAGAA TGCCATACAC ATGAATACAT AAGAACGGGA TCATTTGATA GCAAATTTGG TTTCGGAATT GAATATTTAA ATATTTTATT TGACAGAATC AATAATACAA AACATTTAAA ATTAAAAGGA TTACATGCTC ATATTGGTTC CCAGATTTTT GAATTAGACC CACACAAGGA TCTGGGAGAA ATAATGGTAA ATGTTATTTT AGATGCCAAA AAATTTGGCC ATAATATTCA AAAATTGAAT CTAGGTGGAG GTTTAGGTAT TAAATATACA GAGAATGACG ATCCTCCTTC AATTGATGAA TGGGTAAAAA CAATTTCCAC ATCCGTTGTT AAAGCTTGTA AAAAACACAA TTTAGATTTA CCTACATTGA TGTGTGAGCC TGGAAGATCT ATCGTATCTA CAGCAGGAAT AACAATTTAC AAAATAGGTG CCTTTAAAGA AATCCCCGGG ATCAGAACGT ATTTGTCAGT TGATGGTGGC ATGAGTGACA ATCCAAGACC AATAACATAT CAATCGAATT ATTCTGCATG TTTGGTAAGT AATCCCTTTA ATATTAATTC CAAAAATAAA TATACTATTG CTGGCAAGCA CTGCGAATCA GGAGATGTAT TGTTTAAGGA AATAGAACTA GCAGATTGCA AAACAGGAGA TCTTATATGT GTTTTTGGTA CTGGTGCATA CAATAATTCA ATGAGTTCTA ACTACAACAG AATTCCAAGA CCTGCCGCTC TCTTAGTTTG TAATGGTGAA GCAGAAATCA TTCAAAAAAG AGAAAGTCCA TTTGATCTTT TAAAATATGA TGTCTTGCCT GATCGCTTTC TCAAACAAAA TTAG
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Protein sequence | MEEKKSFLKK KIDLKSPNKN IVPITTTIGN DGKLSVGGCS IEELVKKYDS PLYILDEITL RNSCRAYKNA LEKYYPGKSL PIYASKANSS IFMSNLVSSE GLGLDAVSEG ELLTALKGGV PNEKIVFHGN NKSDKEIEFA VRNNIQVIVD NDYDLERLEG ISNSFNRDLE IMIRFTPGIE CHTHEYIRTG SFDSKFGFGI EYLNILFDRI NNTKHLKLKG LHAHIGSQIF ELDPHKDLGE IMVNVILDAK KFGHNIQKLN LGGGLGIKYT ENDDPPSIDE WVKTISTSVV KACKKHNLDL PTLMCEPGRS IVSTAGITIY KIGAFKEIPG IRTYLSVDGG MSDNPRPITY QSNYSACLVS NPFNINSKNK YTIAGKHCES GDVLFKEIEL ADCKTGDLIC VFGTGAYNNS MSSNYNRIPR PAALLVCNGE AEIIQKRESP FDLLKYDVLP DRFLKQN
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