| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1077 |
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| Symbol | |
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| ID | 3765880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 987312 |
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| End bp | 988952 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637797601 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_397572 |
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| Protein GI | 78779460 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAAG ATCCTGGAAG AATTTTGATC TTTGATACAA CTCTTCGAGA TGGAGAGCAA
TCTCCTGGTG CCAGTTTAAA TCTTGAAGAA AAGCTTGCTA TTGCACATCA ATTAGCAAGA
TTAGGAGTAG ATGTTATTGA GGCTGGATTC CCTTTCGCAA GTCCCGGAGA TTTTAAAGCT
GTTAATAAAA TTTCCAATGA TGTAGGGAAA GAAAACGGTC CTATAATATG CGGTTTAGCT
AGAGCGTCCA AAGGAGATAT AAAAGCATGT TATGAAGCAG TAAGTCCAGC CCCAAAGAAA
AGAATACATA CTTTTATTGC CACAAGCGAT ATTCACCTTA AACATAAACT TAAAAAGTCC
AGAAAAGATG TCCTTCAAAT AGTTCCAGAA ATGGTTAATT ATGCAAAAAC ATTGGTAGAA
GATATTGAGT TTTCTTGTGA AGATGCTTCA AGGAGTGATC CAGATTTTTT ATACGAAGTG
ATTCAATTAG CAATTTCTGC AGGTGCGACA ACTATAAATA TCCCTGATAC TGTTGGATTT
ACAACTCCTA GTGAATTTGG CAAATTAATT TCTGATATAA ATAAAAATGT TCCAAATATT
GATGAAGCAG TAATATCTGT TCATGGTCAT AATGATTTAG GTCTAGCAGT TGCCAATTTT
CTAGAGGCAG TAAAAAATGG AGCGAGACAA CTAGAATGTA CGATTAATGG AATTGGTGAA
AGAGCAGGAA ATGCCTCTCT CGAAGAATTA GTAATGGCGC TGCATGTAAG GAAAAGTTTT
TTTAATAGTT TTTTTAAAAG AAATCCAGAT TCGCCAACTC CTCTTACTGC CATAAGAACA
GAAGAGATAA CAAAAACTTC TAGGCTCGTT TCCAACCTAA CTGGAATGAC TGTTCAACCC
AATAAAGCAA TTGTGGGAGC TAATGCTTTT GCCCATGAAT CAGGCATTCA TCAGGATGGA
GTCTTAAAAA ATAGACTAAC TTACGAAATT ATCGATGCAA AAACTGTTGG TTTGAGTGAT
AACAAAATAT CTTTGGGAAA ACTTAGTGGA AGAAGTGCAG TAAGAGCTAG ATTAGAGGAG
ATGGGATATG ACTTGAGCAG GGAAGACTTA AATGATGCTT TTGCTCGTTT TAAGGATTTA
GCTGATAGGA AAAGAGAAAT TACAGATAGA GACTTAGAAG CAATTGTTAG TGAACAAGTA
CAGCTTCCGG AAGCTAAATT TCAGTTATGT CTTGTACAAG TAAGTTGCGG TAACGCATCT
AAACCTACCG CCACTATTAC GCTTCTAAAC ACGGCAGATA ATACTGAGGA TACAGCTGTA
TCAGTAGGGA CTGGACCTGT TGATGCTGTG TGCGAGGCTT TAAATAAATT AGCTAAAGTT
CCTAATGAAT TAATTGAATT TTCTGTAAAG TCGGTAACAG AAGGTATTGA TGCATTGGGA
GAAGTAACAA TAAGAATCAG AAGGGATAAT AAGATATATT CTGGTCATTC TGCTGACACG
GATGTGGTAG TTGCTGCGGC GAATGCTTAC GTTAATGCTT TAAATAGGCT TGTATTTTCT
GAGAAAAAAA ATTCAATTCA CCCACAATTT GATAATTTAG AAAATTCTAA TAAAACATTT
CTATCTAATC CTGCAAATTA A
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| Protein sequence | MSKDPGRILI FDTTLRDGEQ SPGASLNLEE KLAIAHQLAR LGVDVIEAGF PFASPGDFKA
VNKISNDVGK ENGPIICGLA RASKGDIKAC YEAVSPAPKK RIHTFIATSD IHLKHKLKKS
RKDVLQIVPE MVNYAKTLVE DIEFSCEDAS RSDPDFLYEV IQLAISAGAT TINIPDTVGF
TTPSEFGKLI SDINKNVPNI DEAVISVHGH NDLGLAVANF LEAVKNGARQ LECTINGIGE
RAGNASLEEL VMALHVRKSF FNSFFKRNPD SPTPLTAIRT EEITKTSRLV SNLTGMTVQP
NKAIVGANAF AHESGIHQDG VLKNRLTYEI IDAKTVGLSD NKISLGKLSG RSAVRARLEE
MGYDLSREDL NDAFARFKDL ADRKREITDR DLEAIVSEQV QLPEAKFQLC LVQVSCGNAS
KPTATITLLN TADNTEDTAV SVGTGPVDAV CEALNKLAKV PNELIEFSVK SVTEGIDALG
EVTIRIRRDN KIYSGHSADT DVVVAAANAY VNALNRLVFS EKKNSIHPQF DNLENSNKTF
LSNPAN
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