Gene PMT9312_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1074 
Symbol 
ID3765877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp981665 
End bp984256 
Gene Length2592 bp 
Protein Length863 aa 
Translation table11 
GC content36% 
IMG OID637797598 
ProductDNA gyrase subunit A 
Protein accessionYP_397569 
Protein GI78779457 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATA TTATAGATTC CGGAAATTCT GGATTAAGCG AAGATAACGA TCGAATTATT 
CAGACAGACT TAAGAAATGA GATGTCTCGC TCTTATCTCG AGTATGCAAT GAGCGTCATA
GTAGGTCGTG CCCTTCCTGA CGCGAGAGAT GGATTAAAGC CTGTTCATAG AAGAATTCTT
TATGCAATGT ATGAACTTGG TTTAACAAGC GGTAGACCTT ACAGAAAATG TGCAAGGGTC
GTTGGGGAGG TACTTGGTAA ATATCACCCC CATGGTGACA CTGCTGTCTA TGATGCCTTG
GTGAGGATGG CTCAAGATTT TTCTATGAGA ATGCCACTTA TAGATGGTCA TGGGAACTTT
GGTTCTGTCG ATAACGACCC TCCCGCAGCA ATGAGATATA CAGAATCTCG GCTACAGTCT
CTTACAGATG AAAGTTTACT AGAGGATATT GAATCTGAAA CTGTAGATTT CTCTGATAAT
TTTGACGGAT CACAACAAGA GCCAACAGTC TTACCTGCAA GAATTCCTCA ACTACTTTTA
AATGGATCAT CTGGAATAGC AGTAGGTATG GCAACTAATA TTCCACCCCA TAATTTAGGA
GAATTAATCA ATGGTCTCAA ATCAATAATC AACAATCCTT CAATTGAAGA TAGAGAACTT
TTTGAACTAA TTAAGGGTCC TGATTTTCCT ACTGGTGGTC AAATATTAGG AAGAGATGGT
ATTAGAGAAA CCTTCAAAAC AGGAAGAGGT TCAATAACCA TGAGAGGGGT AGCAAATATT
GAGCAAATTA AATCAGCTGG TAGGGCTGAA AAAGATGCCG TAATAATTAC AGAACTCCCT
TTTCAAACTA ATAAAGCTGG ATTGATAGAG AGAATTGCAG ACTTGGTTAA TGAGAGAAAA
TTAGAAGGTA TTTCTGATAT TAGAGATGAA AGTGATCGAG ATGGGATGAG AATTGTTATC
GAGCTAAAAA GAGACGCATA CCCACAAGTA GTTTTAAATA ACTTATTTAA GTTAACACCT
TTACAAAATA ACTTTAGTGC CAATATTTTA GCTTTAGTTA AAGGAGAACC CACAACTCTC
TCACTTCGGA GAATGTTAGA TGTATTTCTA GATTTTAGGG TAGAGACCAT AAGACGTAGA
ACAGGATTTC TATTAAGAAA GGCAGAAGAA AGAGATCACA TCGTTAAAGG GCTTTTATTG
GCTTTAGATG CTATGGATGA AATTATCAAT CTAATAAGAT CTGCAAAAGA TACAATTTCA
GCTCGAGAAA AATTACAAAC TGATCATGAA TTATCTTCTA CACAAGCAGA AGCTATTTTA
CAAATGCAGT TAAGAAGATT AACCGCCTTA GAGGCAGATA AAATCAAAGC GGAACATGAC
GAATTAACTA AAAAAATCAA CCAATATCAA CAAATCTTAA ATAGTAAAGA AAGAATTTTT
GAAATTATTC TCGAAGAACT TAATAAAATC GATGAAAGAT TTTCTTCTCC AAGAAAAACA
GAAATTTTAG ATCTAGGAGG TGGTCTTGAT GATATTGATC TTATAGCTAA TGATCGATCA
GTAGTTTTAT TAACTGAAGC AGGTTATTTA AAAAGGATGC CTGTTAATGA ATTTGAATCT
ACCAGTCGTG GGTCAAGGGG TAAAGCTGGC ACAAAGACTC AAGGAGATGA TGAGGTGAAA
TTATTTATAA GCTGCAACGA TCATGATACT CTTTTGCTTT TCAGTGATAG AGGGGTAGCT
TATGCTCTCC CAGCATATAG AGTTCCTATG AGTAGCAGAA CGGCAAAAGG TACTCCATCA
GTTCAACTTC TCCCAATACC AAGAGAAGAA AAAATAACTT CACTTGTTGC AGTTGATTCT
TTTGATAACG ATTGTTATTT ATTAATGTTA ACCAAGTCTG GATTTATAAA AAGGACTTCA
CTTTCTGCCT TCTCAAAAAT TCGCTCAAAT GGTCTAATAG CAATTAATCT TGAGGATGGA
GACGCCCTAA CATGGGTCAG ACTATCCAAA GAAGGCGATA GTGTTTTAAT TGGATCAAGA
ACAGGAATTG CGATTCATTT CAGATTAGAT ATAAACGAAT TAAGACCCCT TGGCAGGACA
GCAAGGGGGG TTAAATCAAT GAACTTGAAA AAAGGGGATA ATCTTGTATC CATGGATGTT
TTAACATCTG ATTTGGTTGA TAAATTAGCT AAAATTGATG ATCTTAATAA AGAAATTGAA
GAAAATATTG AAGTTAACTC TTCGGATGGG CCCTGGGTAT TAATAGCCAG TGCATTTGGT
CTAGGAAAGA GAGTGCCAGT AACTCAGTTT AGATTACAAA AAAGAGCAGG GATGGGTTTA
AGAGCGATAA AATTCAGAAT TCAAGATGAT GTTCTTGTTT GTTTAAAGGT CCTAGGAGAA
GGAGAAGAAT TACTTTTTGT GACCGAAAAA GGTGTAATAG TTAGAACAAA TGCAGATAAA
ATTTCTCAGC AATCCAGAGC AGCTACTGGA GTAAAATTAC AACGACTGGA CGAGGGCGAT
CATTTATCAG AAGTGGTATT AGTTCCTCGT GAACAAATAG AGGAAATAGA CCAAACAAGT
CCAGAGGAAT AA
 
Protein sequence
MSDIIDSGNS GLSEDNDRII QTDLRNEMSR SYLEYAMSVI VGRALPDARD GLKPVHRRIL 
YAMYELGLTS GRPYRKCARV VGEVLGKYHP HGDTAVYDAL VRMAQDFSMR MPLIDGHGNF
GSVDNDPPAA MRYTESRLQS LTDESLLEDI ESETVDFSDN FDGSQQEPTV LPARIPQLLL
NGSSGIAVGM ATNIPPHNLG ELINGLKSII NNPSIEDREL FELIKGPDFP TGGQILGRDG
IRETFKTGRG SITMRGVANI EQIKSAGRAE KDAVIITELP FQTNKAGLIE RIADLVNERK
LEGISDIRDE SDRDGMRIVI ELKRDAYPQV VLNNLFKLTP LQNNFSANIL ALVKGEPTTL
SLRRMLDVFL DFRVETIRRR TGFLLRKAEE RDHIVKGLLL ALDAMDEIIN LIRSAKDTIS
AREKLQTDHE LSSTQAEAIL QMQLRRLTAL EADKIKAEHD ELTKKINQYQ QILNSKERIF
EIILEELNKI DERFSSPRKT EILDLGGGLD DIDLIANDRS VVLLTEAGYL KRMPVNEFES
TSRGSRGKAG TKTQGDDEVK LFISCNDHDT LLLFSDRGVA YALPAYRVPM SSRTAKGTPS
VQLLPIPREE KITSLVAVDS FDNDCYLLML TKSGFIKRTS LSAFSKIRSN GLIAINLEDG
DALTWVRLSK EGDSVLIGSR TGIAIHFRLD INELRPLGRT ARGVKSMNLK KGDNLVSMDV
LTSDLVDKLA KIDDLNKEIE ENIEVNSSDG PWVLIASAFG LGKRVPVTQF RLQKRAGMGL
RAIKFRIQDD VLVCLKVLGE GEELLFVTEK GVIVRTNADK ISQQSRAATG VKLQRLDEGD
HLSEVVLVPR EQIEEIDQTS PEE