| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1072 |
|---|
| Symbol | |
|---|
| ID | 3765875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 979767 |
|---|
| End bp | 980090 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637797596 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_397567 |
|---|
| Protein GI | 78779455 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.888152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCAG CTCCAGCCGT AACTGATTCT TCATTTGACA AGGATGTACT GCAAAGTGAT
CTACCAGTAT TGGTTGATTT TTGGGCGCCA TGGTGCGGTC CATGTAGGAT GGTAGCACCA
GTTGTAGAAG AAATCTCGAA AGACTTTGAA GGGAAAATTA AAGTTTTTAA ATTAAATACA
GATGAAAACC CAAATGTTGC GAGTCAATAT GGAATTAGAA GTATTCCAAC ATTAATGATC
TTTAAAGGAG GTCAGAAAGT TGATACTGTG GTTGGAGCCG TACCAAAAGC AACTCTTTCG
AGCACTTTAA CTAAGCATCT ATAA
|
|---|
| Protein sequence | MSSAPAVTDS SFDKDVLQSD LPVLVDFWAP WCGPCRMVAP VVEEISKDFE GKIKVFKLNT
DENPNVASQY GIRSIPTLMI FKGGQKVDTV VGAVPKATLS STLTKHL
|
|---|
| |