Gene PMT9312_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1062 
Symbol 
ID3765865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp973186 
End bp974487 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content32% 
IMG OID637797586 
Producthomoserine dehydrogenase 
Protein accessionYP_397557 
Protein GI78779445 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAT GCAAAATTGG TATTGTAGGT TTCGGAACTG TTGGTTCAGG GGTTTATAAA 
ATATTAAGTT CTGAAGTTGA TTTACATCCA ATTCTAAAAG AAATAGATAT TGAAAAAATA
GCGGTTAAAG ATCTTAGTAA AAAAAGGGAT TTTGATCTAG ATAATAATTT ATTAACTGAT
GATCCATTCA AATTAATTAA TGACCCCTCT ATAGATGTAA TTGTTGAAGT AATGGGCGGG
GTTGATTTGG CGAAAGATAT TATTCTGCAA TCATTAAAAT CAGGTAAATC TGTTGTTACA
GCAAATAAAG CAGTAATTGC AAGATATGGA GAAGAAATAT ACAAAACTGC AGCTAAAGAA
GGAGTTTATA TATTGTCAGA GGCTGCGGTC TGCGGAGGGA TTCCAATAAT TGAACCCTTA
AAAAGATCAT TAAAAAGTAA CAGCATAAAA AAAATGGTTG GGATAATAAA TGGCACAACA
AATTTTATTC TTTCAAAGAT GGCAAATGAA AATGCCGATT ATAAGGAAAC CTTAAAATTA
GCTCAAAGAC TTGGGTATGC AGAATTAGAT CCAACTGCAG ATGTTGAGGG ACATGATGCT
GCTGATAAGA TTTCTATTCT TAGTGAACTC GCATTTGGAG GTAAAATCAA AAGAGACGAG
ATACATTCGG AGGGCATTAG TAAAATTAAT CTAAAGGATA TTGAATATGC CAATAAATTA
GGATTTGAAA TAAAACTTTT GGCGTTGTCC GAAAGGCGAC AAATTAATAG TAACGATTCA
CTTGCTTTGA ATATTTGGGT AGGCCCTTCG TTGATTCCAA AATCTCATCC ATTAGCAACA
GTTATGGGAG TTAACAATGC ATTATTGATA GAGGCTGATC CTCTTGGAGA AATAATGTTA
TATGGTCCTG GTGCAGGAAG TGGTCCAACA GCTGCATCAG TAGTATCAGA TATATTAAAT
CTGCATGCCT CTTCAGTAAA AAATAATAAT TCAATCGATC CATTATTATC TTTTGATTTC
TGGAGAAACT GTCATATCAT AAAATCCAAT GAAATAAATA AAAAAAATTA TCTTAGAATT
ATTTGTCTTG ATAGTCCAGG CGTTATAGGA AAGATTGGAG ATATCTTTGG AAATAATAAT
GTATCAATCG AATCAATTGT TCAGCTAGAT GCAAGTGAGG ATAAAGCCGA AATTGTTGTT
ATAACTCATG AGGTGAATAA TGGAAATTTT GAGAAATCGA AAGATGAAAT AAATGCTCTT
AATGAAGTCA AAATTATTGC TAGTCAATTA AGTTGTATTT AG
 
Protein sequence
MRKCKIGIVG FGTVGSGVYK ILSSEVDLHP ILKEIDIEKI AVKDLSKKRD FDLDNNLLTD 
DPFKLINDPS IDVIVEVMGG VDLAKDIILQ SLKSGKSVVT ANKAVIARYG EEIYKTAAKE
GVYILSEAAV CGGIPIIEPL KRSLKSNSIK KMVGIINGTT NFILSKMANE NADYKETLKL
AQRLGYAELD PTADVEGHDA ADKISILSEL AFGGKIKRDE IHSEGISKIN LKDIEYANKL
GFEIKLLALS ERRQINSNDS LALNIWVGPS LIPKSHPLAT VMGVNNALLI EADPLGEIML
YGPGAGSGPT AASVVSDILN LHASSVKNNN SIDPLLSFDF WRNCHIIKSN EINKKNYLRI
ICLDSPGVIG KIGDIFGNNN VSIESIVQLD ASEDKAEIVV ITHEVNNGNF EKSKDEINAL
NEVKIIASQL SCI