| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1059 |
|---|
| Symbol | |
|---|
| ID | 3765862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 970260 |
|---|
| End bp | 971282 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637797583 |
|---|
| Product | putative ABC transporter, oligopeptides |
|---|
| Protein accession | YP_397554 |
|---|
| Protein GI | 78779442 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGGA ATTTAAATAA ACTTTTTAAT TATTCTTTAT TAAAAATTGC ATTAATACCA
TTAATGTTAT GGATAATTTC TTCATTAGTT TTTATTTTAT TGCGAGTTGC CCCTGGCGAT
CCTGTTGATG CCATACTAGG CTCTGGTGCC AATGAGGTTT CAAGGGAGAT TCTAAGAAAT
AAATTGGGGC TAAATGAGTC CTTGATAAAT CAATATTTTT CATACATAAA TGATATTTTG
CACTTAAATT TTGGTCTATC TCTTAGTACT CAAAAGCCAG TTCTAGATAT TATTCTAAAG
TCATTTCCCG CAAGTCTTGA GCTTGGTTTA TTTTCTATAT TAAGTGCAAT GATAATTGGA
TTCCCATTAG GATTTATTGG GTTAAGACAT AGGGGTAAAA AGACTGATTA TATTGTGAGA
ATATTTGGGA TTGCTACATA TGCGATCCCT CCTTTTTGGG GAGCAATGTT GGCTCAATTA
TTATTTTCTG TGTATTTAAA CATTTCCCCA ATTGGGGGTA GATTTCCAAT CTTTCAGCAA
CAACCCCAAA TTACAGGTTT TCTAGTTTTA GATAGTATTC TGTCAAATAA TATTATTGCT
TTAAAAGATA GCCTCTATCA TCTTGCACTA CCTTCGATTA CCCTTGGCTT TCTATTAAGT
GGTATATTCA GCCGGTCATT AAGAGTGAAT TTGGATAAGA CATTAAAAAG TGATTATGTT
AATGCCGCTA TATGTAGAGG AATATCGAGA AAAAAAATAT TTTTAAACCA TGCTTTACCT
AATGCTCTAT TGCCAATTGT CACTATTTCT GGTTTGACAA TGGCTTCATT AGCAGGAGGC
GCCCTATTGT TTGAAGTAAC TTTTTCATGG CCAGGTATTG CCTTAAGATT ATATGAAGCA
ATTTCTCAGC GAGACTATAC CTTGGTGCAA GGCATTGTAA TTTTTACCTC TATGCTCATA
GTTTCTTTGA ATCTGTTTGT TGATATTTTA ATTGCATATT TAGATCCAAG AATAGAGTAC
TAA
|
|---|
| Protein sequence | MSRNLNKLFN YSLLKIALIP LMLWIISSLV FILLRVAPGD PVDAILGSGA NEVSREILRN
KLGLNESLIN QYFSYINDIL HLNFGLSLST QKPVLDIILK SFPASLELGL FSILSAMIIG
FPLGFIGLRH RGKKTDYIVR IFGIATYAIP PFWGAMLAQL LFSVYLNISP IGGRFPIFQQ
QPQITGFLVL DSILSNNIIA LKDSLYHLAL PSITLGFLLS GIFSRSLRVN LDKTLKSDYV
NAAICRGISR KKIFLNHALP NALLPIVTIS GLTMASLAGG ALLFEVTFSW PGIALRLYEA
ISQRDYTLVQ GIVIFTSMLI VSLNLFVDIL IAYLDPRIEY
|
|---|
| |