| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0971 |
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| Symbol | tpiA |
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| ID | 3765774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 905451 |
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| End bp | 906176 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637797495 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_397467 |
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| Protein GI | 78779355 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGAAAAT CTGTTATTGC TGGTAATTGG AAAATGCATA TGACTTGTGC TGAAGCGAAG
TCTTATTTAG AAGAGTTTAT ACCTTTAATA AAAAACATCA GAGATGATCG TAAAGTTGTT
ATTGCGCCAC CTTTTACAGC TATTTCAACC TTTTCTAAGC ATTCTGATTT TGATTATTTA
GATATTTCTA GTCAAAATAT TCATTGGGAA GATGAAGGAG CATTTACTGC GGAAATATCT
CCAAAAATGC TGATTGAACA TGGAGTCTCA TATGCAATAG TTGGTCACAG TGAACCAAGA
AAATATTTTA GTGAAAGTGA TGAACAAATT AATAAAAGAG CAGTTTTTGC TCAATGTAGT
GGACTTACTC CCATAGTTTG TGTTGGAGAA ACACTAGAAC AAAGAGAGAG AGGAGAGGCT
GATAGAGTTA TCACTAGACA GGTAGAACAA GGGCTAGAAA ATACAGATCC ATCAAATTTA
ATTGTTGCCT ATGAACCAAT TTGGGCTATT GGGACAGGTA AAACATGTGA GGCTAAAGAC
GCTAATAATA TATGTTCTTT GATTCGAAAA TTAATAGGTT TCGATGATGT GATTATTCAA
TATGGAGGAT CAGTTAAACC TAATAATATT GACGAAATAA TGTCGATGAG TGATATAGAT
GGAGTCTTAG TTGGAGGGGC TTCATTAGAT CCAAATAGTT TTGCCAGAAT TGCAAATTAT
CAATAA
|
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| Protein sequence | MRKSVIAGNW KMHMTCAEAK SYLEEFIPLI KNIRDDRKVV IAPPFTAIST FSKHSDFDYL
DISSQNIHWE DEGAFTAEIS PKMLIEHGVS YAIVGHSEPR KYFSESDEQI NKRAVFAQCS
GLTPIVCVGE TLEQRERGEA DRVITRQVEQ GLENTDPSNL IVAYEPIWAI GTGKTCEAKD
ANNICSLIRK LIGFDDVIIQ YGGSVKPNNI DEIMSMSDID GVLVGGASLD PNSFARIANY
Q
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