| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0957 |
|---|
| Symbol | |
|---|
| ID | 3765760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 887723 |
|---|
| End bp | 889147 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637797481 |
|---|
| Product | putative modulator of DNA gyrase; TldD |
|---|
| Protein accession | YP_397453 |
|---|
| Protein GI | 78779341 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.405602 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCTT CTCAAATTAA ATCAAATGAA ATCGAATTTG GTAGTTGCAA TAAATATTTA
TTAGAAGAAA TTATTTTCTA TGGGATGGGA CTTGGAGCTG ATTTCGTAGA AATATTTATA
GAAAATACCG ACAACGCAAG TGTACTTGCT GAAGAGGATT ACATTACAAG TGTAAGTCCA
TCATTTGGGA GAGGTGCTGG CATTAGAATC TTCAAAGACA AAAGGGACGG ATTTGTTAGT
ACTAATGATT TATCTAAACA TGGCTTGATG AGATCAGTAT CCCAAGCTAT TGAGATGTTA
GATATAAATG ACAAAAACAA TAAAGAAGTA TTTAACGGTC TAAATAAATA TAGGGATTAT
AGTTTATCCA AGAAAACATG GATTGATGAA GTTCCATCAA TTAATGAAAT AAGTGAAAAA
CTATTATTCA GCACAAAGTT TCTAAAAAAA AATAACAAAA TAATAACTAG AAAAGGAAGT
TACTCTAGAA ATCTTCAAGA AGTAATAATA GCCTCCAGCG ATGGAACCTA TGCCTCCGAT
ATTAGGTTGC ATCAAACAGT TGGACTTAAC GTAATTGCTA GTGATGCCCA ATATAGATCT
AATGGAAGTA GAAGATTTGG ATCGTCAGGA TTGCCAAATG AATTTAGATT ATGGGATCAT
GAAAAGGCAG CAAATGATGT GTTTGAAAGT TCAATGAACA TGTTGTATGC GGATTATGTT
GAGGCTGGAC AAATGCCTGT TGTATTAGCT AATAAATTTG GTGGCGTTAT ATTTCATGAA
GCCTGTGGAC ATTTGCTAGA GACTACACAA ATAGAGAGAG GAACAACACC CTTCGAGAAT
AAATTGAATG AAAAAATTGC TCATGAATCA GTCACAGCAA TAGATGAAGG ATTATCAGAA
GGATCCTTTG GTTCATTATC AGTTGATGAT GAAGGTATGG AACCAGAGAA ATCAGTCCTT
ATAAAAGATG GTATTTTAAA AAAATTTATA TCCGACAGGG CAGGTGAATT ACGAACTGGC
CATAAAAGAA CAGGCAGTGG AAGAAGGCAA AATTATTCAT TTGCAGCAGC TTCAAGAATG
AGAAATACTT ACATAGCTAA AGGTGAGTAC TCCAAAGAAG ATTTAATAAA TAGTATTAGT
GATGGTCTTT ACTGCAAATC AATGGGTGGA GGCAGTGTAG GTGCTACAGG ACAATTTAAT
TTTGCAGTAG AAGAAGGATA TTTAATTAAA AATGGAAAAT TAACAAACCC TGTAAAGGGA
GCAACTTTGA TTGGTGAGGC TAAAGAGGTT ATGCCAAAAA TATCAATGTG CGGAAATGAC
CTTGAATTAG CCCCTGGATT CTGTGGATCC ATTAGTGGAA GTGTCAACGT AACTGTTGGC
CAACCTCATA TTAAGGTTGA TTCAATCACT GTTGGTGGAA GATAG
|
|---|
| Protein sequence | MLSSQIKSNE IEFGSCNKYL LEEIIFYGMG LGADFVEIFI ENTDNASVLA EEDYITSVSP
SFGRGAGIRI FKDKRDGFVS TNDLSKHGLM RSVSQAIEML DINDKNNKEV FNGLNKYRDY
SLSKKTWIDE VPSINEISEK LLFSTKFLKK NNKIITRKGS YSRNLQEVII ASSDGTYASD
IRLHQTVGLN VIASDAQYRS NGSRRFGSSG LPNEFRLWDH EKAANDVFES SMNMLYADYV
EAGQMPVVLA NKFGGVIFHE ACGHLLETTQ IERGTTPFEN KLNEKIAHES VTAIDEGLSE
GSFGSLSVDD EGMEPEKSVL IKDGILKKFI SDRAGELRTG HKRTGSGRRQ NYSFAAASRM
RNTYIAKGEY SKEDLINSIS DGLYCKSMGG GSVGATGQFN FAVEEGYLIK NGKLTNPVKG
ATLIGEAKEV MPKISMCGND LELAPGFCGS ISGSVNVTVG QPHIKVDSIT VGGR
|
|---|
| |