Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0921 |
Symbol | |
ID | 3765723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 853477 |
End bp | 857214 |
Gene Length | 3738 bp |
Protein Length | 1245 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637797444 |
Product | hydrogenobyrinic acid a,c-diamide cobaltochelatase |
Protein accession | YP_397417 |
Protein GI | 78779305 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.308916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACAGGA TATTAAATAT AGCAGGAAAT GAAAAGAATA AGGATGATTT AATTGAGCAA CCAGCTGCAG ATTTTATTTT TATAACAAGT GTCAAGGCTG ATTTAAATCT TATATCAAAC TTATTGTTAG AAAAAGAATT TGCTTCATTA AAAAATAATA TAAGAGCTTT AGAAATTTCT AATTTAAATT CCTCAGCTCA AATAGATAAT TATTTATTAA AAACAATTAA TTATGCAAAA GTTGTCGTAC TTAGAATATT TGGAGATAAA GGTACATGGA ACTATGGAAT TGAACAACTT TTAAATTGGC AAGCAGTTAA TAAAAAAAGG AAGTTAGTAA TCCTATCAGG TACCATTGAT CAGGAAATTT CCTTATGTGA AATAAGTAGT ATAGATAAAA ATATTGCATT AAATATTTCT AGATTACTAA GATCTGGAGG ACTGGATAAT TATAGAAAGT TTCTTAATTG TTTAAATTTT TTAGTTGTAG ATGAAAAATT AATTCCTGAT GAGTTTTTAA ATATTACTTT TTATGCAGAT CCCTATTTAC ATGATTGGAA AAATGAAAAA GGCGAAAAGA TAGGAATAAT ATCCTATAAA TCACTTTTTT TAGCTAATGA AATTGAAGTA AACGAAAAAC TTAACTTGCA ATTAAGAAAA TGCGGACTAT CTCCTAAAAC ATTTTTTATT TCAACACTAA AAGATCATAT TATTCAGAAG AAATTAATAG ACATTTTTAA AAAAGAAGAT ATTAAACTAA TAATTACCAC AACTTCATTT TCTTCATCGC AAATCAAAAA TAACGATTTA ATTGAAAATT CAACAAATAT TTTTACTTCT CTTAAAATTC CAATTTTACA GCTTCTTTCT TCTAATAGAT CAAGAAAAAA GTGGCTAAAA TCATCTATTG GAATGAATTC ATCTGATTTA TTAATGCAAA TAATTATTCC CGAATTTGAT GGACGAATTA CAACCTGTCC TTCAGCATTT AAAGAAATAA TTTCTAAAAA AAATACACTA TATAGTGAAA TAAGTACTTA CAAAGCTGAT CAAGTAGGTA TTCAATGGAT TTCAAAATTT GCAATAAATT ATGTGAAACT ACAGAAACTT AATAATTTTG ATAAAAGAAT TTGTTTAGTA ATAAGTAATT ATCCAGTAAA GAACGGAAGA ATAGGTAATG GCGTTGGTCT AAATACACCA TCTTCAATAA TAAATATTCT TAATTGGTTA AAAGAAGAAG GTTATGACCT TGGATCTTGT AATTATCCTC AAGATTCTTC GGAATTAATG TCAATGCTTA TAAAAACTAG AACTAATGAT ATTGAATCTC AAAATAATAA ACCATTAGAT TACTTACCAC TTAGTGAATA TTTAGAATAT TGGAATTATT TAGAACTTGA TCCCAAAAAT ATTATTTTTA ATCGTTGGGG TAAACCATCT GATGCGATTG ATTTAGATAA TAAAGGGTTC TCAATAAATG GTCTTAGATT TGGAAAAATA ACATTATTGA TTCAACCACA GCGAGGTTAT GACGCTTTCA CTGATAGAGA TATTCATTCT CCCGATCTTC CACCTCCCCA TAGATATTTA GCACAATATT TTTGGATTGA AAAAGTTTTT AATGCGAATG CTATTTGCCA TATTGGTAAA CATGGGACTG TTGAATGGTT ACCTGGCAAA TCTATAGGTC TCAGCAATAA ATGTTTTCCA AATATTATTT GTCCAGCAAT ACCAAACATA TATCCGTTTA TCGTAAATGA TCCTGGAGAA GGATCCCAAG CTAAAAGAAG AACTGCTGCA ACAATTATTG ATCATTTAAC CCCTCCTTTG GATAGGTCAG AATTATATGG TAAATATTCA ATATTAGAAA ATTATTTAGA CGAATATTTT GAAGCAAAAT TATTAAATTC TAATCGGATT GAAATAATAG AAAAATCCAT TTTTGAATTA ATTAAAAAAG ATTTTAGCGA AATTGCTTTA AACAATAAAA ATAATCAAAT AGAAGAAATT GATTCCTTTC TTTGCAAAAT TAAAGAATCT CAAATTAGGA CAGGTTTGCA TATTTTTGGC AAAAGGCAGA ATGACATTAA TGAAATAAAT TTATTCTTGT GTATTGCTAG AGTACCAAAT GCCAACCGAA TTGGTGTTAT TCAATATATA GCAAAACATT TAAAACTAGA TTTGAATCCT TGGACAAATC AATATGATCA AATGTTAAGT GAAAAGGATA AAAAAATATT ATTGACTTTT TCCAACAAAA ACATTTTAAA CTTTAGAATG GCTATTGATT TTTTGGAACA ACAAGCAAAG TATTTAATAT ATTTGTTTTT TTACAAAAAG AATACCAATA TAAAAAATCT CGAAAAATAT AAAAATCAGA AAATAATAGA CTATTTCTTT AATGAAAAAA AACATAATAA TTATTTTTTA GTATTAAAAA AAGAGATTCT ATATCCAATA ATTAATTCTT CATATAATGA GAAATCATCA TTTATTAATT CATTAAATGG ACAATATGTA AAAAGTGGTC CATCTGGAGC CCCTACGAGA GGTAAAACTG AAGCTTTACC CACTGGTAAA AATTTCTTTT CAGTTGATTC GAGAGGACTG CCAACTGAAT CAGCATGGAG TGTTGGTTGT CAATCTGCTT TACAAATACT TGATTTATAC AAACAAGATA ATGGAGAAGA TTTAAAAAAT ATAGCAATAT CAGTATGGGC AACATCCACA ATGAGAAATG GTGGTGAAGA TATTTGTCAA ATACTATATT TATTAGGAGT ACAGCCTATT TGGGATGGGC CTTCAAGAAG AGTAGTAGAT CTAGAAATCA TTCCTTTATC TATTCTCGAA AGACCAAGGG TTGATGTTAC TTTAAGGATT TCGGGAATGT TTAGAGATGC ATTTCCACAG TTAGTTAAAT TAACTTCTAA GGCAATAAAT CTTGTTTCTA ATCTTGATGA GGATGATAAA TTTAACCCTC TTGCTGGGGC ATCAAGGGAA GGTGATTCAA TTAATCGTAT ATTTGGGTCA GCGCCAGGTT CATATGGAGC AGGTCTACAA GAACTAATTT CAAATTCTAA TTGGGATAAT ATTGATGATT TTGGAGAATC TTTTCTTAAT TGGAGTAAGT GGATTTACAG TGATAATCTT GAACCTATAG AGGATAAAAA AGCATTAGAA AATGCTCTTA AAAATGTTCA ATTAGTTGTT CATAACCAAG ATAATAAAGA ACATGATATT TTAGATTCTG ATGATTATTA TCAGTTTCAG GGTGGATTAT CTTCAGCAGT AAAAAAATTG AGCGGTAAAT TACCTGAAAT GTATCATGGT GATTTATCTA AATTTGGATT ATCTAAAATT TCAAAATTAC AAGATGAAAT TAATAAAGTT GTTATATCAA GAATACTTAA CCCTAAATGG ATAAATGGAA TGAAGGATAA TGGTTATAAA GGAGCGTTTG AATTTTCAGC TACACTAGAT TACTTATATG CTTTTGATGC TTCTACTGAA GTAGTCTCAG ATTGGTGTTA TGAGGAAGTT TATAAATCAT GGTTATGTGA TCTGGATCTT AGAAATTTCT TTCTAGAGAA TAATCCATGG GCTTTAAGAG ATATTGCACA AAGATTTCTT GAAATTGTCA ATAGAAAAAT GTGGAATAAT TGTTCATCAG ATGTCATTGA AAATTTAAAG AACATAATTA TTAATACTGA TTCAATAATT GAAAAAAACG AATTCTGA
|
Protein sequence | MHRILNIAGN EKNKDDLIEQ PAADFIFITS VKADLNLISN LLLEKEFASL KNNIRALEIS NLNSSAQIDN YLLKTINYAK VVVLRIFGDK GTWNYGIEQL LNWQAVNKKR KLVILSGTID QEISLCEISS IDKNIALNIS RLLRSGGLDN YRKFLNCLNF LVVDEKLIPD EFLNITFYAD PYLHDWKNEK GEKIGIISYK SLFLANEIEV NEKLNLQLRK CGLSPKTFFI STLKDHIIQK KLIDIFKKED IKLIITTTSF SSSQIKNNDL IENSTNIFTS LKIPILQLLS SNRSRKKWLK SSIGMNSSDL LMQIIIPEFD GRITTCPSAF KEIISKKNTL YSEISTYKAD QVGIQWISKF AINYVKLQKL NNFDKRICLV ISNYPVKNGR IGNGVGLNTP SSIINILNWL KEEGYDLGSC NYPQDSSELM SMLIKTRTND IESQNNKPLD YLPLSEYLEY WNYLELDPKN IIFNRWGKPS DAIDLDNKGF SINGLRFGKI TLLIQPQRGY DAFTDRDIHS PDLPPPHRYL AQYFWIEKVF NANAICHIGK HGTVEWLPGK SIGLSNKCFP NIICPAIPNI YPFIVNDPGE GSQAKRRTAA TIIDHLTPPL DRSELYGKYS ILENYLDEYF EAKLLNSNRI EIIEKSIFEL IKKDFSEIAL NNKNNQIEEI DSFLCKIKES QIRTGLHIFG KRQNDINEIN LFLCIARVPN ANRIGVIQYI AKHLKLDLNP WTNQYDQMLS EKDKKILLTF SNKNILNFRM AIDFLEQQAK YLIYLFFYKK NTNIKNLEKY KNQKIIDYFF NEKKHNNYFL VLKKEILYPI INSSYNEKSS FINSLNGQYV KSGPSGAPTR GKTEALPTGK NFFSVDSRGL PTESAWSVGC QSALQILDLY KQDNGEDLKN IAISVWATST MRNGGEDICQ ILYLLGVQPI WDGPSRRVVD LEIIPLSILE RPRVDVTLRI SGMFRDAFPQ LVKLTSKAIN LVSNLDEDDK FNPLAGASRE GDSINRIFGS APGSYGAGLQ ELISNSNWDN IDDFGESFLN WSKWIYSDNL EPIEDKKALE NALKNVQLVV HNQDNKEHDI LDSDDYYQFQ GGLSSAVKKL SGKLPEMYHG DLSKFGLSKI SKLQDEINKV VISRILNPKW INGMKDNGYK GAFEFSATLD YLYAFDASTE VVSDWCYEEV YKSWLCDLDL RNFFLENNPW ALRDIAQRFL EIVNRKMWNN CSSDVIENLK NIIINTDSII EKNEF
|
| |