Gene PMT9312_0918 details

Gene Information

• Locus tag: PMT9312_0918
• Symbol: uvrC
• ID: 3765720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: +
• Start bp: 850222
• End bp: 852180
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 637797441
• Product: excinuclease ABC subunit C
• Protein accession: YP_397414
• Protein GI: 78779302
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.312337
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAATT CCTCTATCGA AAAAATAGAT AACAAATATA ATTTTAAAAT TGAATATAAA 
TTAATTAATA ATAAGGAATT ATTAAAATCA AGATTATCCG AAATTCCAAA GTCATCTGGT 
TGTTATCTTT TTAAAGATAT TGATAATAAC TTACTTTATA TAGGTAAATC AAAAAAACTA 
CGCAGTAGAG TAAGTAGTTA TTTCAATAAT TATTCAGATT TAACTCCCCG ATTAAGTTTG 
ATGGTTCGTC AAATAACTGA AATAGAAATA ATAGTCACAG ATAGCGAATA TGAAGCATTA 
AATTTAGAGT CAAATTTAAT TAAAACAAAC AAACCATACT TTAATATTCT TTTAAAGGAT 
GATAAGAAAT ATCCATATCT TTGTATAACT TGGAGTGAGA AATATCCTCG AATATTTATT 
ACAAGAAGAA GAAGAAATAG AAATAATTTA GATAGATATT ATGGACCTTA TGTTGATGTC 
GGATTATTAA GGAGAACATT GTTTACGATA AAAAAGATAT TTCCACTTAG ACAAAGACCA 
AGGCCAGTCT ATAAAGATAG AACTTGTTTG AATTATTCAA TAGGAAGATG TCCAGGTGTT 
TGCCAAGAAG TTATATCATC TGACGATTAT AAAAAAATAA TGCAACAAGT ATCTATGATA 
TTTCAGGGAA GAAATGATGA CTTAGAAATA TTTTTACAAA AAAAAATGCT GCAATTTTCA 
AATGATTTAG ATTATGAGAA TGCAGCAAAA ATAAGGGACC AAATTTCAGG TTTAAAATTA 
TTAACTGAAT CACAAAAAAT ATCAATACCA GATTCTTCAA TTAATAGAGA TATCTTTGGA 
ATAGTTTCAG AAAAAAATGT AGCTAGTATA CAAATTTTCC AAATGAGATC TGGTAAGCTC 
ATTGGGAGAA TTGGCTATAG TCAAAAATTA AATAATGAAG ATGAAAATCA TATTCTACAA 
AAGATATTAG AAGAACATTA TATGAATGTT GAAGCTGTAG AAATACCATC AGAAATTCTT 
ATTCAATATA ACCTTCCAAA ACAAGCAACC ATAGAGGATT GGTTAACGGA GCTAAGAAAA 
AAGAAAGTAA AAATATTAAT CCCAAAAAGA AATAAAAAAC ATGAAACTGT AGAAATGGTT 
TTAAAAAATG CGAAATTAGA ATTAGATAGA ATATTAAATG GGATACAAGA TAATGAATCA 
TCTATTGAGG ATCTTGCCCA AATACTTGAA TTAAGCGAAC AACCTAAAAG AATTGAAGGT 
TATGATATAA GCCATATTCA AGGTAGTGAC CCTGTAGCAT CACAAGTCGT TTTTATTGAT 
GGGATTCCTT CTAAACAGCA TTATAGGAAA TATAAAATTA AAGATCCAAA CGTTTTTGTA 
GGACATAGTG ATGATTTTGC TTCGATATAT GAAGTAATAC ATAGAAGGTT TAAAAAATGG 
TCAAGATTTA AAAAAAGCGG AGGGGATTTT TCAATATTAA ATGATAAAAC GAATAGTAAA 
TTAGACAATG AACTTTTATC AGATTGGCCT GATTTAATAA TGATAGATGG AGGAAAAGGA 
CAGTTGAATG CAGCTATTAA AGCATTAAAT GAATTAAATC TTGAGGAAGA AGTAACTATA 
TGTTCATTAG CAAAAAAAAA TGAAGAAATA TTTATTCCAG GCTTTACTAA GTCTCTTGAC 
ACTGATGAAA ATCAGAAAGG AGTTCTTCTA TTAAGAAGGG TAAGAGATGA AGCACATAGA 
TTTGCATTAT CTTTTCATAG AGACAAAAGA TCTAAGAGAA TGAATAGATC TCAATTGTCC 
CAAATCAGTG GATTAGGACC ATCAAGAATA AGAGAATTGC TTGAGTATTT TAAATCAATA 
GACGCGATAA GAATAGCTAG TAAAGAGGAT TTATCAAAAG TTAAAGGACT TGGAAAAAAC 
TCAGTAAATG ATATATATGA ATATTTTAAC GAGTTATAA 

 

Protein sequence

MSNSSIEKID NKYNFKIEYK LINNKELLKS RLSEIPKSSG CYLFKDIDNN LLYIGKSKKL 
RSRVSSYFNN YSDLTPRLSL MVRQITEIEI IVTDSEYEAL NLESNLIKTN KPYFNILLKD 
DKKYPYLCIT WSEKYPRIFI TRRRRNRNNL DRYYGPYVDV GLLRRTLFTI KKIFPLRQRP 
RPVYKDRTCL NYSIGRCPGV CQEVISSDDY KKIMQQVSMI FQGRNDDLEI FLQKKMLQFS 
NDLDYENAAK IRDQISGLKL LTESQKISIP DSSINRDIFG IVSEKNVASI QIFQMRSGKL 
IGRIGYSQKL NNEDENHILQ KILEEHYMNV EAVEIPSEIL IQYNLPKQAT IEDWLTELRK 
KKVKILIPKR NKKHETVEMV LKNAKLELDR ILNGIQDNES SIEDLAQILE LSEQPKRIEG 
YDISHIQGSD PVASQVVFID GIPSKQHYRK YKIKDPNVFV GHSDDFASIY EVIHRRFKKW 
SRFKKSGGDF SILNDKTNSK LDNELLSDWP DLIMIDGGKG QLNAAIKALN ELNLEEEVTI 
CSLAKKNEEI FIPGFTKSLD TDENQKGVLL LRRVRDEAHR FALSFHRDKR SKRMNRSQLS 
QISGLGPSRI RELLEYFKSI DAIRIASKED LSKVKGLGKN SVNDIYEYFN EL