| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0912 |
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| Symbol | dapF |
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| ID | 3765714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 845299 |
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| End bp | 846159 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 637797435 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_397408 |
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| Protein GI | 78779296 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA TAAATTTTGA AAAATATCAA GGTAACGGAA ATGATTTCGT AGTAATTGAT
TCTAGAGGAA ATGATTTATA TAAAAATTAC AAGTCAAATA AAATATTTGA TATAAAACAA
ATTTGCAACA GGCAATTTGG TATTGGAGCA GATGGTGTAA TTTTTATAGA AGAACCTAAT
GAAGATAATT ATGCAAAAAT GATAATCTTT AATTCTGATG GCTCTGAAGC ACAAATGTGT
GGAAACGGAA TTAGGTGTTT AGTTGAGTAT CTCCACGTAA ATGATTCAAT GAATAATAAA
AATATAGAAT ATAAAATTGA GACTAAAGCA GGTTTAAAAA TTGCAAAATA TATAAATGAT
GAAATTACAG TAAAAATGGG AGTTCCAATT TTAGAAAGTC AAAATATTCC AACAACAATT
GAAAAAAAAA TCAATTCAAT TCCTTCACAC GAATTTATTG AGAAAAATTT CAATAATATG
GGTTATGCCG TAGGAATGGG AAATCCTCAT TTAATATTCT TTGTAAAAGA CATAGAGTCA
ATTGTTCTTT ACAGACTAGG TCCTATATTT GAAAAAAATG AATTATTTCC TGAAAAAACT
AATGTACATT TTTGTCAAAT CATAAATAGA GATAATATCA AAGTAAAAGT ATGGGAAAGA
GGTGCAGGAC CAACCTTAGC CTGTGGAACA GGTGCCTGTG CTATCCATGT AGCAGCTTAT
AAATTAGGAC TTTGTAATCC ACAAACCATA GTAACTTTAC CAGGAGGTAA TCTTAAAATT
GATTGGTCAA AAGACGATTT TGAAGTCATG ATGACCGGTA ATGCTAAAAA GGTTTTCTCA
GGATCAATGT TAGTAAATTA A
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| Protein sequence | MKNINFEKYQ GNGNDFVVID SRGNDLYKNY KSNKIFDIKQ ICNRQFGIGA DGVIFIEEPN
EDNYAKMIIF NSDGSEAQMC GNGIRCLVEY LHVNDSMNNK NIEYKIETKA GLKIAKYIND
EITVKMGVPI LESQNIPTTI EKKINSIPSH EFIEKNFNNM GYAVGMGNPH LIFFVKDIES
IVLYRLGPIF EKNELFPEKT NVHFCQIINR DNIKVKVWER GAGPTLACGT GACAIHVAAY
KLGLCNPQTI VTLPGGNLKI DWSKDDFEVM MTGNAKKVFS GSMLVN
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