Gene PMT9312_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0880 
Symbol 
ID3765681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp811714 
End bp813135 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content36% 
IMG OID637797402 
Productglutamine synthetase, glutamate--ammonia ligase 
Protein accessionYP_397376 
Protein GI78779264 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.980739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAT CTCCTCAAGA TGTTTTAAGT CAAATTAAAG ACGAAGGAAT TGAACTCATC 
GATTTAAAAT TCACAGATAT TCATGGAAAA TGGCAACATT TAACACTTAC ATCAGACATG
ATAGAAGAGG ATTCTTTTAC TGAAGGCTTA GCGTTTGATG GGTCATCAAT AAGAGGTTGG
AAAGCAATTA ATGCATCTGA TATGTCAATG GTGCCTGATT CAAGTACAGC TTGGATCGAT
CCTTTTTATA AACATAAAAC ATTAAGTATG ATTTGCTCTA TTCAAGAGCC AAGAAGCGGT
GAGCCTTATG ATAGATGTCC AAGGGCTTTA GCTCAAAAGG CATTAAAATA TTTAGACTCT
ACTGGCATAG CAGATACTGC ATTTTTTGGA CCTGAGCCAG AATTCTTTTT ATTTGATGAT
GTTAGATATG ACTCTAAAGA AGGAGGTTGT TTTTATAGTG TAGATACTAT TGAAGCACCA
TGGAATACAG GGAGAATAGA AGAAGGTGGG AACTTAGGAT ACAAAATACA ATATAAAGAA
GGATATTTTC CAGTAGCTCC AAATGATACT GCGCAAGATA TCAGATCTGA GATGCTTCTT
CTTATGGGTG AATTAGGTAT CCCTACAGAA AAACATCACC ATGAAGTTGC TGGTGCCGGC
CAACACGAGC TTGGAATGAA ATTTGATTCT TTAATAAAAG CTGCTGATAA CGTTATGACG
TATAAATACG TGGTTAGAAA CGTAGCTAAA AAATATGGGA AAACTGCAAC ATTTATGCCT
AAGCCTGTAT TTAACGATAA TGGGACTGGA ATGCATGTTC ACCAAAGTTT ATGGAAGAGT
GGACAGCCAC TATTCTTTGG TGAAAGTGCC TATGCAAATT TATCCCAAAC AGCTAGATGG
TATATCGGAG GAATACTTAA ACATGCCCCT TCATTCCTAG CGTTTACTAA TCCAACAACA
AATAGTTATA AAAGATTGGT TCCAGGATTT GAAGCACCTG TAAATCTAGT TTATTCTGAG
GGTAATAGAT CGGCTGCAGT AAGAATACCT TTAACTGGTC CAAGTCCAAA AGCTAAAAGA
TTAGAATTTA GATCAGGTGA CGCACTTGCT AACCCATATT TAGCTTTCTC TGTAATGATG
CTCGCTGGTA TTGATGGGAT CAAAAATCAA ATAGATCCTG GTGATGGTGT AGATGTTGAT
TTATTCGAAC TTCCTGCAGA AGAACTTGCA AAAATTGATA CAGTACCTTC ATCTCTTAAT
GATTCACTTA ATGCACTCAA AGCAGACAAG GATTATCTAT TAGCTGGTGG AGTATTTACA
GAAGATTTTA TTGATAACTT TATCGATATA AAATACGAAG AGGTACAACA ATTAAGACAG
AGGCCTCATC CACATGAATT CTTTATGTAT TACGATGCAT AA
 
Protein sequence
MSKSPQDVLS QIKDEGIELI DLKFTDIHGK WQHLTLTSDM IEEDSFTEGL AFDGSSIRGW 
KAINASDMSM VPDSSTAWID PFYKHKTLSM ICSIQEPRSG EPYDRCPRAL AQKALKYLDS
TGIADTAFFG PEPEFFLFDD VRYDSKEGGC FYSVDTIEAP WNTGRIEEGG NLGYKIQYKE
GYFPVAPNDT AQDIRSEMLL LMGELGIPTE KHHHEVAGAG QHELGMKFDS LIKAADNVMT
YKYVVRNVAK KYGKTATFMP KPVFNDNGTG MHVHQSLWKS GQPLFFGESA YANLSQTARW
YIGGILKHAP SFLAFTNPTT NSYKRLVPGF EAPVNLVYSE GNRSAAVRIP LTGPSPKAKR
LEFRSGDALA NPYLAFSVMM LAGIDGIKNQ IDPGDGVDVD LFELPAEELA KIDTVPSSLN
DSLNALKADK DYLLAGGVFT EDFIDNFIDI KYEEVQQLRQ RPHPHEFFMY YDA