| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0866 |
|---|
| Symbol | ksgA |
|---|
| ID | 3765667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 800675 |
|---|
| End bp | 801505 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 637797388 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_397362 |
|---|
| Protein GI | 78779250 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.322275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCTA AAAACTATCA TCAAAAAAAA AGATTTGGAC AACACTGGTT GGTAAATAAA
AAAATATTAG AAAAAATTAA AGAAATTGCT GTTCTTAATG AAAATGACTT TATTTTAGAA
ATTGGTCCTG GTAAAGGAGC TTTAACCTCT AAGTTGTTAG ATTCAGAAAT TAAAAAATTA
CATGCAATTG AGTTAGATAA AGATTTAATA AATTTATTAA ATGATAAATT CAATAATAAT
GATAAGTTTT CACTGCAGCA GGGAGATATT CTTTCTGTAA ATTTAGATTC GATTAATAAG
AAGATTACAA AAGTGATTGC AAATATTCCT TACAATATAA CTGGCCCAAT ATTGGATATT
TTCATAGGTC GATTGGGCAT TATAAGAAAC TATAATTACG AAAAAATAAT ATTTTTAATG
CAGAAAGATG TTGTAGATAG GATTTTGTCA AAAGAAGGTA GTCCCAATGC TGGTGCGCTT
AGTATAAGAA TACAACTTTT ATCAAAAATA AAAAGAATAT GTGATGTTCC GCCTTCATCA
TTTAGTCCGC CTCCAAAAGT TTTTTCTTCT TTAGTAGTTT TCGAACCAAT TAAAAATGAT
TTAAGATTAG ATATTAGTCT AGAAAAATAT ATAGATAAAC TTCTTCGAAT TTCATTTAAT
TCAAGAAGAA AAATGCTTAG AAATACTCTT AATTCAATAC TTTCAAATGA AGAGATAAAT
GAATTATCTG AATCTTCAAA AGTTTGTTTT AATTTAAGAC CACAAGATAT TTCAATTCAC
CAATGGATTA AGCTTGCAGA AAATTGTATT AAAATTAAAA AAAAAATTTA A
|
|---|
| Protein sequence | MNSKNYHQKK RFGQHWLVNK KILEKIKEIA VLNENDFILE IGPGKGALTS KLLDSEIKKL
HAIELDKDLI NLLNDKFNNN DKFSLQQGDI LSVNLDSINK KITKVIANIP YNITGPILDI
FIGRLGIIRN YNYEKIIFLM QKDVVDRILS KEGSPNAGAL SIRIQLLSKI KRICDVPPSS
FSPPPKVFSS LVVFEPIKND LRLDISLEKY IDKLLRISFN SRRKMLRNTL NSILSNEEIN
ELSESSKVCF NLRPQDISIH QWIKLAENCI KIKKKI
|
|---|
| |