Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0854 |
Symbol | dnaE |
ID | 3765655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 789211 |
End bp | 792708 |
Gene Length | 3498 bp |
Protein Length | 1165 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637797376 |
Product | DNA polymerase III subunit alpha |
Protein accession | YP_397350 |
Protein GI | 78779238 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTCA TTCCACTTCA TAATCATAGT GATTACAGTC TTCTTGATGG GGCAAGTCAA ATTTCTAAAA TTGTAGATAG AGCTTGCGAA CTTGGAATGG ATTCTATTGC CCTGACAGAT CATGGAGTTA TGTATGGAGT TCTTGATTTG GTCAAGAAGT GTAAGGAGAA AGGTATAAAA CCAATTATTG GTAATGAAAT GTATGTGATT AATGGTTCTA TTGATGATCC TCAACCTAAA AAAGAAAAAA GATATCATTT GGTTGTTTTA GCAAAGAACC GTACTGGCTA TAAGAATCTC GTAAAGTTAA CAACAATTAG TCACTTAAAT GGGATGAGAG GTCGAGGAAT TTTTTCTAGA CCTTGTATTG ATAAATTTCT TTTAAGTAAA TATAGCGAGG GTCTTATAAT TTCTACAGCT TGTCTTGGCG GAGAGATCCC TCAGGCCATC TTAAAAGGAA GATTAGATGT GGCAGAGGAT ATAGCTCTTT GGTATAAAAA TTTATTTGCA GATGATTTTT ATCTGGAAAT ACAAGATCAC GGCTCTATTG AGGATAGAAT TGTTAACATT GAATTATTAA GAATTGGGAA GAAGCATCAA ATAAAAGTTA TCGCTACCAA TGATGCTCAC TACTTATCAA ATATGGATGT TGAAGCACAT GATGCTTTGC TTTGTGTATT AACGGGAAAA CTAATAAGCG ATGAAAAAAG ATTGAGATAT ACCGGTACAG AATATATTAA AAGTGAAAAT GAAATGCTTG AACTTTTTAA GGATCACATT GATGATGAAT CAATTAAAGA GGCAGTGAAC AATACAGTAG AAATTTCGCA AAAAATTGAA GTTTTTGATT TGTTTGGTAA ATATAGAATG CCAAAATTCC CGCTTAACGA AGACACAGAT TCATTTTCTC TACTAACGCA ATTATCTAAT GAAGGTCTTT TAAAAAGACT TAAAAAAAAT ACTCTGACAG AAGTTGATGA GAATTATAAA AAAAGATTAT CTTCGGAATT GAAAATCATA AAAGATATGG GTTTCCCAGA TTATTTTTTG GTTGTTTGGG ACTATATCAA ATTTGCTAGA GATAACTCTA TCCCAGTAGG ACCAGGTAGA GGTTCTGCAG CAGGTTCGTT AGTAGCCTAT GCTCTTCAAA TCACAAATAT AGATCCTGTT GAGCATGGAT TATTATTTGA GAGATTTTTA AATCCTGCAA GAAAGTCTAT GCCAGATATT GATACTGACT TTTGTATTGA TAGGAGAAAT GAAGTTATTG ATTATGTTAC TAATCGCTAT GGAGAGGATA AAGTTGCTCA AATAATTACT TTTAATAAAA TGACTTCTAA GGCGGTTTTA AAAGATGTTG CAAGGGTTCT AGATATTCCT TATGGAGAGG CAGATAAATT AGCTAAGTTA ATACCCGTTG TAAGAGGTAA ACCCCATAAA CTTAATGAAA TGATTGATAA GAATTCACCT AGCCAAGAGT TTAGAGATAA ATATATTAAT GACAATAGGG TAAAAAAATG GATTGATTTG GCTTTGAGAA TTGAAGGAAC TAATAAAACA TATGGAGTCC ATGCTGCAGG AGTTGTTATT GCGTCAGATC CTCTTGACGA ACTTGTACCT CTTCAAAGGA ATAATGAGGG ACAAATAATA ACCCAATATT CTATGGATGA TATTGAATCA CTTGGACTAT TGAAAATGGA TTTCTTGGGT CTTAAGAATC TTACGATGAT TGAAAAGACA GTTTCTCTGA TTAATCAATC CACTGGAAAG ACAATAAATA TTGATAACTT ACCCCAAAAT GATGATAAAA CATTTGAGCT TATTGGTAGA GGAGATCTTG AAGGTATATT TCAACTTGAA TCTTCTGGTA TGAAACAGGT TGTAAAGGAC TTTAAGCCTA ACTCACTTGA GGATATTTCA TCTATCTTAG CTCTTTATAG ACCTGGTCCT CTTGATGCTG GCCTAATACC TAAATTCATA AATCGAAAAA ATGGAAACGA AAAGGTTGAT TTCCCTCATC CTTTCATAAA GTCAATTCTT ACCGAAACCT ATGGAATTAT GGTTTATCAA GAACAAATTA TGAAAATTGC TCAAGACTTA GCCGGTTATT CTCTTGGTGA TGCTGATTTA CTTCGAAGAG CAATGGGAAA AAAGAAAGTA TCAGAGATGG TTAAGCATAG GAATATATTT GTAGACGGCT CTATGAAAAA GGGCGTAAAT GAAAAATTAG CGAATGATCT TTTTGATCAA ATGGTTTTAT TTGCAGAATA TTGTTTTAAC AAAAGCCACT CAACTGCTTA TGGTGCAGTA ACTTATCAAA CTGCATTTTT AAAAGCCCAT TTTCCTGTTG CATATATGGC AGCCCTTTTA AGTGTGAATT CTGGCTCCAG TGACAAGATG CAAAGATATA TTTCTAATTG TTATTCGATG GGAATAGAAG TTATTTCACC AAGCATTAAT TTCTCTGGAA TTGATTTCAC TATTAAAAAT AATCAGATTT TATTTGGTCT GTCTGCAATT AAAAACTTAG GAGATTCTGC TATAAGAAAT ATAATTGAAA ATCGTAATAA TTCCGGAAGT TTTAAGTCAC TATCCGATCT GTGTGATCGT TTACCTTCAA ATGTTCTTAA CAAAAGAAGT ATTGAATCTC TAATTCTTTG TGGAGCACTT GATGAGTTTT CAAATAATAA TAATAGAGCT CAATTATTGT CAGATCTAGA ACATGTCATT GAATGGGCCT CTTCACGAAA TCGTGATAGA TTATCTGGCC AAGGAAATCT ATTTGACTCT AAAGAAGAAT TTTCAAATGT AGCATTTTCA GATTCACAAT TAGCTAAGGT TGATGATTAT TCACTTATTG ATAAGTTAAA GCTTGAAAAG CAGCTTTTAG GCTTTTACTT ATCTGATCAT CCGCTAAAAC ATTTAACTAA GCCAGCAAAA CTTGTATCTC CAATTAGTGT TTCGCAGTTA GAAGAAACAA AAGATAGAAC CAAAGTCTCT TTAGTTGGTA TGATCCCTGA GTTGAAGCAA ATCACTACGA GAAAAGGAGA TAGGATGGCT ATAGTTCAGC TTGAAGATCT TTCTGGCAGT TGTGAAGCAA TAGTTTTTCC TAAAACCTAT GTCAGATTAT CAGAATTTCT TTTGACTGAT ACTAGATTAT TAGTCTGGGG AACGATAGAT AAAAAAAGTG ATAAAACTCA ATTAATAATC GATGATTGCA GAGAAATAGA TAACCTTAAA TTACTTATTA TTAATCTTGA AAGTTCTCAA GCATCAGATG TAAGAGTACA AAATACGTTA AGAGACTGTT TAATTAAATT TAAGCCAGAT AAAGGTAAAT GTGGAATTAA GATTCCAGTT TTAGCTGCAG TAAGAAGTAA AAATAGCGTT ACCTACGTTA AATTTGGTGA ACAATTCTGT ATTGGAGATA TCCAAGGTGC ATGCAAATTA TTGGAAAATA AATCATTCCA TGTTAATTTG AAATCTTTAG TTTCCTAA
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Protein sequence | MGFIPLHNHS DYSLLDGASQ ISKIVDRACE LGMDSIALTD HGVMYGVLDL VKKCKEKGIK PIIGNEMYVI NGSIDDPQPK KEKRYHLVVL AKNRTGYKNL VKLTTISHLN GMRGRGIFSR PCIDKFLLSK YSEGLIISTA CLGGEIPQAI LKGRLDVAED IALWYKNLFA DDFYLEIQDH GSIEDRIVNI ELLRIGKKHQ IKVIATNDAH YLSNMDVEAH DALLCVLTGK LISDEKRLRY TGTEYIKSEN EMLELFKDHI DDESIKEAVN NTVEISQKIE VFDLFGKYRM PKFPLNEDTD SFSLLTQLSN EGLLKRLKKN TLTEVDENYK KRLSSELKII KDMGFPDYFL VVWDYIKFAR DNSIPVGPGR GSAAGSLVAY ALQITNIDPV EHGLLFERFL NPARKSMPDI DTDFCIDRRN EVIDYVTNRY GEDKVAQIIT FNKMTSKAVL KDVARVLDIP YGEADKLAKL IPVVRGKPHK LNEMIDKNSP SQEFRDKYIN DNRVKKWIDL ALRIEGTNKT YGVHAAGVVI ASDPLDELVP LQRNNEGQII TQYSMDDIES LGLLKMDFLG LKNLTMIEKT VSLINQSTGK TINIDNLPQN DDKTFELIGR GDLEGIFQLE SSGMKQVVKD FKPNSLEDIS SILALYRPGP LDAGLIPKFI NRKNGNEKVD FPHPFIKSIL TETYGIMVYQ EQIMKIAQDL AGYSLGDADL LRRAMGKKKV SEMVKHRNIF VDGSMKKGVN EKLANDLFDQ MVLFAEYCFN KSHSTAYGAV TYQTAFLKAH FPVAYMAALL SVNSGSSDKM QRYISNCYSM GIEVISPSIN FSGIDFTIKN NQILFGLSAI KNLGDSAIRN IIENRNNSGS FKSLSDLCDR LPSNVLNKRS IESLILCGAL DEFSNNNNRA QLLSDLEHVI EWASSRNRDR LSGQGNLFDS KEEFSNVAFS DSQLAKVDDY SLIDKLKLEK QLLGFYLSDH PLKHLTKPAK LVSPISVSQL EETKDRTKVS LVGMIPELKQ ITTRKGDRMA IVQLEDLSGS CEAIVFPKTY VRLSEFLLTD TRLLVWGTID KKSDKTQLII DDCREIDNLK LLIINLESSQ ASDVRVQNTL RDCLIKFKPD KGKCGIKIPV LAAVRSKNSV TYVKFGEQFC IGDIQGACKL LENKSFHVNL KSLVS
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