Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0828 |
Symbol | |
ID | 3765628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 765864 |
End bp | 767018 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637797349 |
Product | putative urea ABC transporter |
Protein accession | YP_397324 |
Protein GI | 78779212 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.508169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAGTTAC TTCTAGATAG TCTTTTTAAT GGTGTTGCGA TCGGATCTGT ATTACTTGTT GCCGCATTAG GTCTAGCAAT TGTTTTTGGG CTTATGGGTG TTATTAATCT TGCCCATGGA GAATTAATGA TGCTTGGAGC TTACACAACA TACGTTACAC AATTAATTTT CAAATTACCT ATATTAAAAC CTTTCTACAA TTCATACATA ATAGTTTCAA TTTTCCTTGC TTTTATTGTT AGTGGAGTAG TAGGCATTCT CCTGGAAAAA ACTATAATAA GAAAGCTTTA TGGAAGTCCA CTAGAAACAC TTCTGGCAAC TTGGGGCGTA AGCTTAATTC TTCAACAATT TGTCAGAAGT GTACCTTTAG CTTATGGAAC CGGTCTAGTT ATAAGTCTGA TAATTGGTTT ATTTTTACCA ACAACCTTTC CTTCTAAAAT AAAAGAATCA ATAAACTTTA AATATTTTAA ATTTAGTTCC TGGATATTTG CCGCTTTAAC TGGGGTCCTG ACAGGTAGCG TAATCTCATC CTCTGTAAGC AAACTTAGTA GAGCAAGTGC TCGTAATGTT GATGTAACAG CGCCCTCATG GATGAGAGGT CAAGTAGAAA TTATTGGCAC TGCATTTCCT AAAACAAGAT TAATGATAAT TGTAATTACT CTAATCTCTG TAATAGCAAT AACATTATTT CTTAATCAAA GTGCTTGGGG CATGCGTATA AGAGCAGTTA CTCAGAACCG ACAAATGAGT GATTGCCTTG GTATATCTAC TGAAAAAGTC GATATAATTA CTTTTGGGAT TGGATCTGGC TTAGCAGGAG TTGCAGGAGT AGCAGTATCT CTTTTAGGCT CTGTAGGACC AAATGTTGGC GGAAACTATA TAGTTGGTTG TTTTATGGTT GTAGTGCTGG GAGGCGTAGG AAATTTGTTA GGAACAGTAC TTGCTTCATT TGGAATAGGA ATAATGACTG ATTTAATTGG AGCTGGAAGG TTCTTATCAA TATGGCCAGA TATGCCTTTA CCTTTATCAA ACACAATCAA CTTTTTTGCG ACCACAAGTA TGGCAAGAGT GATGATATTT GCACTAATTG TTATATTCTT ACAATTTAAA CCTACAGGTT TATTTCCTCA AAAAGGAAGG ATGGTTGAAA ACTAA
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Protein sequence | MELLLDSLFN GVAIGSVLLV AALGLAIVFG LMGVINLAHG ELMMLGAYTT YVTQLIFKLP ILKPFYNSYI IVSIFLAFIV SGVVGILLEK TIIRKLYGSP LETLLATWGV SLILQQFVRS VPLAYGTGLV ISLIIGLFLP TTFPSKIKES INFKYFKFSS WIFAALTGVL TGSVISSSVS KLSRASARNV DVTAPSWMRG QVEIIGTAFP KTRLMIIVIT LISVIAITLF LNQSAWGMRI RAVTQNRQMS DCLGISTEKV DIITFGIGSG LAGVAGVAVS LLGSVGPNVG GNYIVGCFMV VVLGGVGNLL GTVLASFGIG IMTDLIGAGR FLSIWPDMPL PLSNTINFFA TTSMARVMIF ALIVIFLQFK PTGLFPQKGR MVEN
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