Gene PMT9312_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0828 
Symbol 
ID3765628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp765864 
End bp767018 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content35% 
IMG OID637797349 
Productputative urea ABC transporter 
Protein accessionYP_397324 
Protein GI78779212 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID[TIGR03409] urea ABC transporter, permease protein UrtB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.508169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGTTAC TTCTAGATAG TCTTTTTAAT GGTGTTGCGA TCGGATCTGT ATTACTTGTT 
GCCGCATTAG GTCTAGCAAT TGTTTTTGGG CTTATGGGTG TTATTAATCT TGCCCATGGA
GAATTAATGA TGCTTGGAGC TTACACAACA TACGTTACAC AATTAATTTT CAAATTACCT
ATATTAAAAC CTTTCTACAA TTCATACATA ATAGTTTCAA TTTTCCTTGC TTTTATTGTT
AGTGGAGTAG TAGGCATTCT CCTGGAAAAA ACTATAATAA GAAAGCTTTA TGGAAGTCCA
CTAGAAACAC TTCTGGCAAC TTGGGGCGTA AGCTTAATTC TTCAACAATT TGTCAGAAGT
GTACCTTTAG CTTATGGAAC CGGTCTAGTT ATAAGTCTGA TAATTGGTTT ATTTTTACCA
ACAACCTTTC CTTCTAAAAT AAAAGAATCA ATAAACTTTA AATATTTTAA ATTTAGTTCC
TGGATATTTG CCGCTTTAAC TGGGGTCCTG ACAGGTAGCG TAATCTCATC CTCTGTAAGC
AAACTTAGTA GAGCAAGTGC TCGTAATGTT GATGTAACAG CGCCCTCATG GATGAGAGGT
CAAGTAGAAA TTATTGGCAC TGCATTTCCT AAAACAAGAT TAATGATAAT TGTAATTACT
CTAATCTCTG TAATAGCAAT AACATTATTT CTTAATCAAA GTGCTTGGGG CATGCGTATA
AGAGCAGTTA CTCAGAACCG ACAAATGAGT GATTGCCTTG GTATATCTAC TGAAAAAGTC
GATATAATTA CTTTTGGGAT TGGATCTGGC TTAGCAGGAG TTGCAGGAGT AGCAGTATCT
CTTTTAGGCT CTGTAGGACC AAATGTTGGC GGAAACTATA TAGTTGGTTG TTTTATGGTT
GTAGTGCTGG GAGGCGTAGG AAATTTGTTA GGAACAGTAC TTGCTTCATT TGGAATAGGA
ATAATGACTG ATTTAATTGG AGCTGGAAGG TTCTTATCAA TATGGCCAGA TATGCCTTTA
CCTTTATCAA ACACAATCAA CTTTTTTGCG ACCACAAGTA TGGCAAGAGT GATGATATTT
GCACTAATTG TTATATTCTT ACAATTTAAA CCTACAGGTT TATTTCCTCA AAAAGGAAGG
ATGGTTGAAA ACTAA
 
Protein sequence
MELLLDSLFN GVAIGSVLLV AALGLAIVFG LMGVINLAHG ELMMLGAYTT YVTQLIFKLP 
ILKPFYNSYI IVSIFLAFIV SGVVGILLEK TIIRKLYGSP LETLLATWGV SLILQQFVRS
VPLAYGTGLV ISLIIGLFLP TTFPSKIKES INFKYFKFSS WIFAALTGVL TGSVISSSVS
KLSRASARNV DVTAPSWMRG QVEIIGTAFP KTRLMIIVIT LISVIAITLF LNQSAWGMRI
RAVTQNRQMS DCLGISTEKV DIITFGIGSG LAGVAGVAVS LLGSVGPNVG GNYIVGCFMV
VVLGGVGNLL GTVLASFGIG IMTDLIGAGR FLSIWPDMPL PLSNTINFFA TTSMARVMIF
ALIVIFLQFK PTGLFPQKGR MVEN