| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0805 |
|---|
| Symbol | |
|---|
| ID | 3765605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 749893 |
|---|
| End bp | 750813 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637797326 |
|---|
| Product | putative mRNA binding protein |
|---|
| Protein accession | YP_397301 |
|---|
| Protein GI | 78779189 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.788288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC TTGTAATGGG CGGCACTAGA TTTGTTGGCA AGTCTTTGGT TGGAAAGTTA
TTAAACCAAA GTCATGATAT TGATATTTTT ACAAGAGGTA ATAAAGCTAA TCCTAAAAAT
ACAAATTTAA TTAAGGGAGA TAGGAATAAT TTAGAAAGTA TAGTTAAGCT AAGGAATGAA
AAGTATGATG TTGTTTATGA TATTTCGGGA CGAGAGTTAG AACAAACGAA ACTTCTTATA
GAAAATTTAG CTGACTCTTT CAAGAGATAT ATATATGTCA GCTCTGCAGG CGTTTATAAA
GATAATCATG AACTACCTTT ATCTGAAGAT GATCCTATTG ACCAAGATAG TAGGCACAAA
GGGAAAGTGG AGACAGAAAA TTGGTTGATA AACCAAAAAA TTCCTTTTAC AAGTTTTAGA
CCAACTTATA TTTATGGACC AGGAAATTAT AATAAGATCG AAAATTGGTT TTTTGAAAGG
TTATTTTCCA ATAAATCAAT CCCAATCCCC GGTGACGGGT CTTTGATTAC ACAGTTAGGC
CATGTTTCAG ATCTAACTGA TGTAATGATT AGGTGCATAA ATTATGAAAA ATCTAAAAAT
AATATTTATA ACTGCTCAGG TGAAAAAGGA GTTACTATTA AGGGTTTGAT ATATTTCTGC
GCAAAAGTTC TTGGATTAAA CCAAAATGAG ATTTCTTTAA GAACATTTGA TTATCAAAAA
TTAGATCCTA AATCTCGAAA GGGATTTCCA ATTAGATTAA ATCATTATCA GACTGATATT
TCTAAGATTA AAAGCGATTT GGATTGGGAA CCAAATTTTG ATTTACTTAA TGGTTTAAAG
GATAGTTTTG TGAAAGATTT TAATTATAAA AAGGGTGAGG AGTTTGATGA GAATTTAGAT
AAGATTCTTT TTAATGCTTA G
|
|---|
| Protein sequence | MKILVMGGTR FVGKSLVGKL LNQSHDIDIF TRGNKANPKN TNLIKGDRNN LESIVKLRNE
KYDVVYDISG RELEQTKLLI ENLADSFKRY IYVSSAGVYK DNHELPLSED DPIDQDSRHK
GKVETENWLI NQKIPFTSFR PTYIYGPGNY NKIENWFFER LFSNKSIPIP GDGSLITQLG
HVSDLTDVMI RCINYEKSKN NIYNCSGEKG VTIKGLIYFC AKVLGLNQNE ISLRTFDYQK
LDPKSRKGFP IRLNHYQTDI SKIKSDLDWE PNFDLLNGLK DSFVKDFNYK KGEEFDENLD
KILFNA
|
|---|
| |