Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0782 |
Symbol | |
ID | 3765582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 729536 |
End bp | 731209 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637797303 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_397278 |
Protein GI | 78779166 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.729892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC TCAGATCATC TGCAATAACC CAAGGTGTGC AAAGATCCCC TAACAGATCG ATGTTAAGAG CTGTTGGATT TAATGATGAA GATTTTAATA AACCTATTGT TGGAGTTGCA AATGGATACA GCACCATAAC ACCATGCAAT ATGGGTTTAA ATAAGTTAGC TCTAAAAGCT GAAGAGTCAA TAAAAAGATC AGGTGGGATG CCTCAGATGT TTGGGACCAT AACAGTAAGC GATGGCATTT CTATGGGAAC AGAGGGCATG AAATACTCCC TAGTTTCAAG AGAAGTTATT GCTGATTCAA TTGAAACAGC ATGCAATGCT CAGAGTATGG ATGGAGTACT TGCTATAGGT GGATGTGACA AAAATATGCC GGGTGCCATG ATTGCGATTG CAAGAATGAA TATTCCCTCA ATTTTCATTT ATGGAGGGAC AATAAAGCCT GGGAAATTGC ATGGAGAAGA TCTTACTGTT GTTAGTGCAT TTGAAGCTGT TGGACAATTA ACAGCCGGCA AAATTAATGA AGAAAGGCTA ATCCAAGTTG AGAAAAATTG TATTCCTGGT GCTGGTAGCT GTGGAGGAAT GTTTACAGCT AATACAATGT CTGCGGTTAT TGAAGTATTA GGGTTAAGTC TTCCTCACAG TTCCACTATG GCTGCTGAAG ATCTTGAAAA AGAACTAAGT GCAGATAAAA GTGCTGAGAT ATTAGTCTCT GCAATAGAAA AAGATATAAG ACCTCTAGAC CTAATGACTA AGAAAGCATT TGAAAATGCA ATATCAGTAA TTATGGCAAT TGGCGGATCA ACAAATGCGG TATTGCACAT CTTAGCTATT GCGAATACTG CAGGAATAGA TATCAACATT AATGATTTTG AGAGAATCAG ACAAAAAGTA CCCGTTATTT GTGACCTTAA ACCGAGTGGT AAATATGTGA CGGTGGATCT TCATAAGGCA GGTGGGATTC CACAAGTAAT GAAAATACTT TTAAATGCAG GATTAATTCA TGGCGATTGC AAAAACATTG AAGGCAAAAC CATCTCAGAA TACTTACAGA ATATTCCAGA TAAGCCTCCA ACAAATCAAA ATGTCATAAG AGACATAGAT GACCCTCTTT ATAAAAAAGG ACATCTAGCG ATATTAAAAG GTAACTTAGC GAGCGAAGGT TCTGTAGCCA AAATTAGCGG AGTAAAAAAC CCTGTATTAA CTGGTCCAGC AAAGATTTTT GAAAGTGAAG AGGATTGTTT AAAATCGATA TTAAATAACG ATATCAAAGC TGGTGATGTG GTTGTTATTA GAAACGAAGG TCCTGTAGGA GGTCCAGGCA TGAGAGAAAT GTTAGCTCCA ACATCTGCGA TTGTTGGTCA AGGGCTAGGA GAGAAGGTAG CTTTAATTAC CGATGGCAGA TTTAGCGGTG GTACCTATGG TCTTGTTGTG GGTCACATAG CTCCAGAGGC TGCTGTTGGA GGAAATATTG CTCTAATAAA ACAAGGTGAT TTAATTACAG TGGATGCTGT AAAACAACTA ATTGAAGTTG ATTTATCTGA CGAAGAATTA GAAAAAAGAA AAAAAGATTG GGTAAAACCT ATACAAAAAT ACAAAAGAGG AATTCTTTCA AAATATTCGA GAATCGTAAG CACATCAAGT TTAGGGGCTG TTACTGATTT ATAA
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Protein sequence | MNKLRSSAIT QGVQRSPNRS MLRAVGFNDE DFNKPIVGVA NGYSTITPCN MGLNKLALKA EESIKRSGGM PQMFGTITVS DGISMGTEGM KYSLVSREVI ADSIETACNA QSMDGVLAIG GCDKNMPGAM IAIARMNIPS IFIYGGTIKP GKLHGEDLTV VSAFEAVGQL TAGKINEERL IQVEKNCIPG AGSCGGMFTA NTMSAVIEVL GLSLPHSSTM AAEDLEKELS ADKSAEILVS AIEKDIRPLD LMTKKAFENA ISVIMAIGGS TNAVLHILAI ANTAGIDINI NDFERIRQKV PVICDLKPSG KYVTVDLHKA GGIPQVMKIL LNAGLIHGDC KNIEGKTISE YLQNIPDKPP TNQNVIRDID DPLYKKGHLA ILKGNLASEG SVAKISGVKN PVLTGPAKIF ESEEDCLKSI LNNDIKAGDV VVIRNEGPVG GPGMREMLAP TSAIVGQGLG EKVALITDGR FSGGTYGLVV GHIAPEAAVG GNIALIKQGD LITVDAVKQL IEVDLSDEEL EKRKKDWVKP IQKYKRGILS KYSRIVSTSS LGAVTDL
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