Gene PMT9312_0767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0767 
Symbol 
ID3765567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp713121 
End bp715283 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content29% 
IMG OID637797288 
Productglycyl-tRNA synthetase, beta subunit 
Protein accessionYP_397263 
Protein GI78779151 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00745719 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTAAAT ATTTACTTGA GATAGGAACA GAGGAGTTGC CCGCAAAATT TTCTCATTCT 
GTTCTAGAGC AATTTAAATC TCTAATAGAA TTTGAATTGG ATAAAAAGTT AATCAAATTC
AATAATATTG TTGTTACCTC TACGCCCAGG AGAATAGTTC TACTTCTTGA AGGTTTAGTC
GATTATGGAG AAGATAAGAC GATAGTTAGA AAAGGACCTA AGGCAAATTC AGCTTTTTTA
AATGGATCTC CTACTAATGC TGCTTTAGGA TTCGCTAATA GTTTAGGTAT AGATGTAGAT
GATCTAGAAA TAAAAAATAC GGAAAAGGGT GAATTTGTTT TTGGAAAAAA AATTGAGAAG
GGACAATCAA CAAGAATTTC TTTGTCTTCA ATTATTCCTA AAGTAGTGAA GAGTCTCCAA
GGCACTCGAT TTATGAAATG GGGGGCTGGG AACATTAAGT TTTCAAGACC TATTAGGTGG
ATTACCTCTA TCTATAATGA TGATATTCTT GATTTCGCAT TTAATGAATG TGATCCAAAT
ATTCAAATAA GTAATAAATC AAAAAGTCAT AGACTAATCA ATGAAGTTTT TGAAGTTCAG
AATCCTGATA ATTTTTTTGA ATTATTGAAA CAAAATAGAG TATTAGTTAA GCGGCACGAG
AGACAAGAAC AAATTGAAAC TCTAATACAT CAGGCTTCTA AATTACTAAA TCTGAAACCT
GACCTTTCTA AAGAATTGCT TAATGAACTA ACTGATTTAG TTGAATGGCC AGACTTAGTT
ATTGGTAAAT TTAGTGAAGA ATTTCTTGAT CTTCCTGTTG AAGTTCTCTC AACAGTAATG
AAAAGTCATC AGAGATATGT GCCTCTTTTG TTAAAAAATA ATACTTTCTC AAAACTAGAT
TTAAGCTCTG AAAAAAACAT TAGTACAAAT TTTTTCGTTA TTTCAAATGG TCTTGAAGAA
TCAAATAATA ATATTGCCAA GGGTAATGAG AAAGTATTGA GAGCAAGGTT CTCAGATGCA
AAGTTTTTTG TAGAAAGTGA TAAAAAAGTT TCTTCAATTG AAAGAAATGA AAAACTTAAA
TCTGTTTCTT ATTTGAAGGG ATTGGGAAAT ATTTTCCAGA GAGTAGAGAG AATACAGGAA
GTTACTAAAA AAATCCTTAC ATTTTTAAAT GATAAGTCTT TAGAAGATAA AAAAATAATA
GAAGCTGCCA GATATTGTAA AAATGACTTA TGTAGCGAAA TTGTTTTCGA ATTCCCAGAG
TTGCAAGGAA TAATGGGTGG TAAATATCTC AAAAATGAAG GATTTAGTGA GGATGTTTGT
TTAGCTGTAG CTGAACATTA TTTACCTTCT TTTTATAAAG ATGCTTTGCC ATCTTCAAAA
TATGGTGCAA TAGTTTCTAT TGCAGATAAG GTTGAAACTT TAATAAGTAT ATTTATTTCC
GGTAAGCGTC CAAGTGGATC ATCTGATCCT TATGCTTTGA GAAGAAATTT AAATGGAGTG
ATTAAAATAA TTTGGGATTA TGAACTTGAT TTACCTTTAG ATAATTTATT CAAGGAACTT
TTTGATTTTT GGAAAATCTC ATTCCCTAAT TTGGACTTCT CAAAAGATAA AGTTTTAAAT
GATTTAAATG AATTTTTAGT TCAAAGAATT GTTAGTCATC TCGAAGAAAT ATCGCTAAGT
AAAGAATTAA TAAAGGCTAT TTGCTCTTCT GATGAACTTT ATCAAAAAAG AATATTGAAT
ATTGTTGATC TAAAAAATAG GATTAAATCT ATTGTCAACT TTAAAGAGAA AGAAACTTTT
GTTGAAATCC AGAAGGTCAT TACTAGGGTT AGCAAATTAG CTAATAGCAG TAATCTTTCA
ACAGATGTTT TCTTAACAGG AGATTATGTA AACACAAAAA TTTTTGAAAA AGAATGTGAA
TTGAAAGTTT TTGAATTTAT TAGAGAATTA GAAAAACTCT TTTCAACTGG TTATTGCAAT
TATTTGAAAC TTCTAAATTT GTTCGAGATT AATAAAAATA CTATTGAGGA TTTGTTTGAT
AATGAAAAGG GTGTTCTGGT AATGTCAGAA GATATAAAAA TAAGAAATAA TAGACTTAAC
TTATTGAGCC TAATTAGAAA TTATTCTCTA CTGATCGCTG ACTTTACACT TTTGAACTCT
TAA
 
Protein sequence
MSKYLLEIGT EELPAKFSHS VLEQFKSLIE FELDKKLIKF NNIVVTSTPR RIVLLLEGLV 
DYGEDKTIVR KGPKANSAFL NGSPTNAALG FANSLGIDVD DLEIKNTEKG EFVFGKKIEK
GQSTRISLSS IIPKVVKSLQ GTRFMKWGAG NIKFSRPIRW ITSIYNDDIL DFAFNECDPN
IQISNKSKSH RLINEVFEVQ NPDNFFELLK QNRVLVKRHE RQEQIETLIH QASKLLNLKP
DLSKELLNEL TDLVEWPDLV IGKFSEEFLD LPVEVLSTVM KSHQRYVPLL LKNNTFSKLD
LSSEKNISTN FFVISNGLEE SNNNIAKGNE KVLRARFSDA KFFVESDKKV SSIERNEKLK
SVSYLKGLGN IFQRVERIQE VTKKILTFLN DKSLEDKKII EAARYCKNDL CSEIVFEFPE
LQGIMGGKYL KNEGFSEDVC LAVAEHYLPS FYKDALPSSK YGAIVSIADK VETLISIFIS
GKRPSGSSDP YALRRNLNGV IKIIWDYELD LPLDNLFKEL FDFWKISFPN LDFSKDKVLN
DLNEFLVQRI VSHLEEISLS KELIKAICSS DELYQKRILN IVDLKNRIKS IVNFKEKETF
VEIQKVITRV SKLANSSNLS TDVFLTGDYV NTKIFEKECE LKVFEFIREL EKLFSTGYCN
YLKLLNLFEI NKNTIEDLFD NEKGVLVMSE DIKIRNNRLN LLSLIRNYSL LIADFTLLNS