Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0767 |
Symbol | |
ID | 3765567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 713121 |
End bp | 715283 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637797288 |
Product | glycyl-tRNA synthetase, beta subunit |
Protein accession | YP_397263 |
Protein GI | 78779151 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00745719 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTAAAT ATTTACTTGA GATAGGAACA GAGGAGTTGC CCGCAAAATT TTCTCATTCT GTTCTAGAGC AATTTAAATC TCTAATAGAA TTTGAATTGG ATAAAAAGTT AATCAAATTC AATAATATTG TTGTTACCTC TACGCCCAGG AGAATAGTTC TACTTCTTGA AGGTTTAGTC GATTATGGAG AAGATAAGAC GATAGTTAGA AAAGGACCTA AGGCAAATTC AGCTTTTTTA AATGGATCTC CTACTAATGC TGCTTTAGGA TTCGCTAATA GTTTAGGTAT AGATGTAGAT GATCTAGAAA TAAAAAATAC GGAAAAGGGT GAATTTGTTT TTGGAAAAAA AATTGAGAAG GGACAATCAA CAAGAATTTC TTTGTCTTCA ATTATTCCTA AAGTAGTGAA GAGTCTCCAA GGCACTCGAT TTATGAAATG GGGGGCTGGG AACATTAAGT TTTCAAGACC TATTAGGTGG ATTACCTCTA TCTATAATGA TGATATTCTT GATTTCGCAT TTAATGAATG TGATCCAAAT ATTCAAATAA GTAATAAATC AAAAAGTCAT AGACTAATCA ATGAAGTTTT TGAAGTTCAG AATCCTGATA ATTTTTTTGA ATTATTGAAA CAAAATAGAG TATTAGTTAA GCGGCACGAG AGACAAGAAC AAATTGAAAC TCTAATACAT CAGGCTTCTA AATTACTAAA TCTGAAACCT GACCTTTCTA AAGAATTGCT TAATGAACTA ACTGATTTAG TTGAATGGCC AGACTTAGTT ATTGGTAAAT TTAGTGAAGA ATTTCTTGAT CTTCCTGTTG AAGTTCTCTC AACAGTAATG AAAAGTCATC AGAGATATGT GCCTCTTTTG TTAAAAAATA ATACTTTCTC AAAACTAGAT TTAAGCTCTG AAAAAAACAT TAGTACAAAT TTTTTCGTTA TTTCAAATGG TCTTGAAGAA TCAAATAATA ATATTGCCAA GGGTAATGAG AAAGTATTGA GAGCAAGGTT CTCAGATGCA AAGTTTTTTG TAGAAAGTGA TAAAAAAGTT TCTTCAATTG AAAGAAATGA AAAACTTAAA TCTGTTTCTT ATTTGAAGGG ATTGGGAAAT ATTTTCCAGA GAGTAGAGAG AATACAGGAA GTTACTAAAA AAATCCTTAC ATTTTTAAAT GATAAGTCTT TAGAAGATAA AAAAATAATA GAAGCTGCCA GATATTGTAA AAATGACTTA TGTAGCGAAA TTGTTTTCGA ATTCCCAGAG TTGCAAGGAA TAATGGGTGG TAAATATCTC AAAAATGAAG GATTTAGTGA GGATGTTTGT TTAGCTGTAG CTGAACATTA TTTACCTTCT TTTTATAAAG ATGCTTTGCC ATCTTCAAAA TATGGTGCAA TAGTTTCTAT TGCAGATAAG GTTGAAACTT TAATAAGTAT ATTTATTTCC GGTAAGCGTC CAAGTGGATC ATCTGATCCT TATGCTTTGA GAAGAAATTT AAATGGAGTG ATTAAAATAA TTTGGGATTA TGAACTTGAT TTACCTTTAG ATAATTTATT CAAGGAACTT TTTGATTTTT GGAAAATCTC ATTCCCTAAT TTGGACTTCT CAAAAGATAA AGTTTTAAAT GATTTAAATG AATTTTTAGT TCAAAGAATT GTTAGTCATC TCGAAGAAAT ATCGCTAAGT AAAGAATTAA TAAAGGCTAT TTGCTCTTCT GATGAACTTT ATCAAAAAAG AATATTGAAT ATTGTTGATC TAAAAAATAG GATTAAATCT ATTGTCAACT TTAAAGAGAA AGAAACTTTT GTTGAAATCC AGAAGGTCAT TACTAGGGTT AGCAAATTAG CTAATAGCAG TAATCTTTCA ACAGATGTTT TCTTAACAGG AGATTATGTA AACACAAAAA TTTTTGAAAA AGAATGTGAA TTGAAAGTTT TTGAATTTAT TAGAGAATTA GAAAAACTCT TTTCAACTGG TTATTGCAAT TATTTGAAAC TTCTAAATTT GTTCGAGATT AATAAAAATA CTATTGAGGA TTTGTTTGAT AATGAAAAGG GTGTTCTGGT AATGTCAGAA GATATAAAAA TAAGAAATAA TAGACTTAAC TTATTGAGCC TAATTAGAAA TTATTCTCTA CTGATCGCTG ACTTTACACT TTTGAACTCT TAA
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Protein sequence | MSKYLLEIGT EELPAKFSHS VLEQFKSLIE FELDKKLIKF NNIVVTSTPR RIVLLLEGLV DYGEDKTIVR KGPKANSAFL NGSPTNAALG FANSLGIDVD DLEIKNTEKG EFVFGKKIEK GQSTRISLSS IIPKVVKSLQ GTRFMKWGAG NIKFSRPIRW ITSIYNDDIL DFAFNECDPN IQISNKSKSH RLINEVFEVQ NPDNFFELLK QNRVLVKRHE RQEQIETLIH QASKLLNLKP DLSKELLNEL TDLVEWPDLV IGKFSEEFLD LPVEVLSTVM KSHQRYVPLL LKNNTFSKLD LSSEKNISTN FFVISNGLEE SNNNIAKGNE KVLRARFSDA KFFVESDKKV SSIERNEKLK SVSYLKGLGN IFQRVERIQE VTKKILTFLN DKSLEDKKII EAARYCKNDL CSEIVFEFPE LQGIMGGKYL KNEGFSEDVC LAVAEHYLPS FYKDALPSSK YGAIVSIADK VETLISIFIS GKRPSGSSDP YALRRNLNGV IKIIWDYELD LPLDNLFKEL FDFWKISFPN LDFSKDKVLN DLNEFLVQRI VSHLEEISLS KELIKAICSS DELYQKRILN IVDLKNRIKS IVNFKEKETF VEIQKVITRV SKLANSSNLS TDVFLTGDYV NTKIFEKECE LKVFEFIREL EKLFSTGYCN YLKLLNLFEI NKNTIEDLFD NEKGVLVMSE DIKIRNNRLN LLSLIRNYSL LIADFTLLNS
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