Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0732 |
Symbol | |
ID | 3765532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 682628 |
End bp | 685114 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637797253 |
Product | DEAD/DEAH box helicase-like |
Protein accession | YP_397228 |
Protein GI | 78779116 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0692265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA TTAAACAAAA TAGTAGGCAA AGTAATTCTA TTTCTAAAAT TAAACAGTTT TTCTTCTCAA ATGGATGGGA GCCATTAACC TACCAAGAAG AATCTTGGAA AGCATTTTTA AATGGGGAAA ACGGACTAAT ACAAGTTCCT ACTGGATGCG GCAAAACTTA CGCTTCATTA ATGGGACCTT TATCACAGTT AGAAGATCCC AAAAATAATA AAAGTGTGCA AATATTATTA ATAACGCCTT TAAAAGCACT AAGTAGAGAT CTAAAAAATT CCGTCCAATT AGCAGCTTTA CATTTTAATA AAGAAATCAC TGTTGAAATC AGGAATGGGG ATACAACCCC ATATGAAAAG AAAAAGCAAC TAGCTAAACC ACCTAATATT CTTATCACGA CTCCAGAGTC TTTATCTCTT TTACTTTCTA ATAAAGGATC TAATAATCTG TTTAAGGAGT TGTCATCAAT AATTATTGAC GAATGGCATG AATTGATGGG TAGTAAAAGA GGAAACCAGT GCGAGTTATC TTTAAGTTGG CTAAGAGGTA ATATTAAAAA TTTACAAATT TGGGCAATGT CTGCAACTAT TGGAAATATT GAAGAAGCAG CAAGAGCAAT AGTTGGTATG AGCGCTATAA AACCCAAAAT TATAAGTACA AATATTCAAA AAGAGATAGA AATTATAAGC GTTTTACCAG AGGAGGAAAC GACCTTTCCA TGGAGTGGCC ATCTAGGAAT AAGAAGTCAT TCTTCACTTT TAAAAATCCT AGATAAAAAT AAAAGCACCC TATTATTCAC CAATACAAGA AATCAATCTG AAAGATGGTA TCAATGTCTT AAATTTTTTC TGCCAGAGAT GGAAGACAAA ATCGCACTTC ATCACGGCTC CCTCGATAAA GAAGATAGAA AAAAAGTTGA AGAAGGGGTT AAAGACGGAT TAATAAAATG GGTAGTCTGC ACCAGCTCGC TAGATTTGGG AGTTGACTTC CAACCTGTAG ATCAAATAGT TCAAATTGGT AGTGCAAAGA ATTTAGCTAG ACTTATCCAA AGAGCGGGAA GAAGTGCTCA TAGACCAGGC GGGAAATCAA AAATAATTTT TATGCCTACC AATTCTTTGG AGTTATTTGA GATTAGTGCA ATGAGAAGAA TAATAAAAAG TGGTATATCT GAGGAAATTA GACTTCCTGA ATTATCTTAT GATGTACTTC TTCAACATCT AATAAGTTTG GCATGCGGAA ATGGCTTTGA TCCGAAAATT GAGAAAGAAA GAATTAAAAG TTGTTGGAGT TATAGAAACT TAAAAGATCA AGATTGGGAT TGGTGTCTTG ACTTTTTAGA ATATGGAGGA AAATGTCTTA AAGCATACCC AAAATATAAA AAGATAATTA AAGAAGAATC ACAAAATAAT AATGTAAACT TTAAATATTT TGTAAAAGAC AAATCTTTAA TAAGAATGCA TAAGTTCAAT ATTGGGACAA TTACGAGCGA CAAATTTGTG AATGTAAAAT ATATGAAAGG TAAATCCTTG GGAAATTTAG AAGAGAATTT TGCCTCAAAA TTAAATCCTG GAGATACCTT TTACTTTGCC GGTAAAATGC TTCAATTTGT AAGAATCAGA GATATGATTT TATACGTTAA AAAATCTACA AAAAAAAGTT CTCTAATTCC TGCATGGGTT GGAGGTCAAA TGGCAATTTC TGATCTACTT TGTGAAAGTT TGAGAAAAGA AATAGATATA TGCAATGAAC CAGAAAATTA TGATTGCTCG AATCCTGAAC TAAATTCATT ACGCCCAATA TTGAAGAAAC AAAAGGTTCT TTCAAATATT CCAAAGAAAG ATGAATTCCT TATAGAAATA TATAAAACCA AGGATTTATC AACTATTTTT GTTTTTACAC TTGATGGCAA ATTTGTAAAT GAAGGAATTG CATTTCTATG GGCTTTAAGA TTAGCAAAAT TAAAACAATC TACATTTAGT ATTACTGCTA ATGATTTTGG ATTCAGCTTA ACTAGCTCAG AAGATTATGA TTTTTCCATA ATTAAAAAAG AAGCTGATTA TTTTTTTGAT AACAAAAAAT TAGAGGAAGA TCTAGAAAAT GCAATAAATT TTTCAGAATT GACAAAACGT AGATTTAAAC ATATTGCCCA GATAAGTGGA CTAGTAAATC AAAATAATCC AACCAAAACA AAAACTTCTT CTCAACTTCA AATAAGTTCA AGTCTTTTCT ACGATGTCTT TACTAAATAT GAAGAAGGCC ATCTTTTGAT AAAACAATCG CATCAAGAAG TTAAAGAATA TCAATTAGAA AATAAAAGAA TATCTAGATC ATTAGAAAGA TTAAAGAATT TAAAAATGCT ATTAAACGAG ATAAAAACTC CAACTCCTTT TGCTTTCCCT TTATTAGTTG AAAGACTTAA AAATACCTTA AGCAATGAAC CAATAGAAAG AAGAGTAGAA AAACTTATAA AAAAATATAG TGATTAA
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Protein sequence | MNNIKQNSRQ SNSISKIKQF FFSNGWEPLT YQEESWKAFL NGENGLIQVP TGCGKTYASL MGPLSQLEDP KNNKSVQILL ITPLKALSRD LKNSVQLAAL HFNKEITVEI RNGDTTPYEK KKQLAKPPNI LITTPESLSL LLSNKGSNNL FKELSSIIID EWHELMGSKR GNQCELSLSW LRGNIKNLQI WAMSATIGNI EEAARAIVGM SAIKPKIIST NIQKEIEIIS VLPEEETTFP WSGHLGIRSH SSLLKILDKN KSTLLFTNTR NQSERWYQCL KFFLPEMEDK IALHHGSLDK EDRKKVEEGV KDGLIKWVVC TSSLDLGVDF QPVDQIVQIG SAKNLARLIQ RAGRSAHRPG GKSKIIFMPT NSLELFEISA MRRIIKSGIS EEIRLPELSY DVLLQHLISL ACGNGFDPKI EKERIKSCWS YRNLKDQDWD WCLDFLEYGG KCLKAYPKYK KIIKEESQNN NVNFKYFVKD KSLIRMHKFN IGTITSDKFV NVKYMKGKSL GNLEENFASK LNPGDTFYFA GKMLQFVRIR DMILYVKKST KKSSLIPAWV GGQMAISDLL CESLRKEIDI CNEPENYDCS NPELNSLRPI LKKQKVLSNI PKKDEFLIEI YKTKDLSTIF VFTLDGKFVN EGIAFLWALR LAKLKQSTFS ITANDFGFSL TSSEDYDFSI IKKEADYFFD NKKLEEDLEN AINFSELTKR RFKHIAQISG LVNQNNPTKT KTSSQLQISS SLFYDVFTKY EEGHLLIKQS HQEVKEYQLE NKRISRSLER LKNLKMLLNE IKTPTPFAFP LLVERLKNTL SNEPIERRVE KLIKKYSD
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