Gene PMT9312_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0717 
Symbol 
ID3765517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp666279 
End bp667007 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content30% 
IMG OID637797238 
Producttwo component transcriptional regulator 
Protein accessionYP_397213 
Protein GI78779101 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTA AAGATCATAA AAGTTTGCAA GACTCAAGAA TTCTTCTTGT AGAGGATGAT 
AAGAGTATTA GGCTTACTGT CAGTGAAACC TTGATCAGCG AAGGTTTCAA AGTATCAAGT
TTCAAAGACG GTTTAAGTGC CTTAGATTTT ATTAATAATG ATATTAAAAA AGATGTTGAC
CTAATAATTC TAGATTTAAT GTTGCCAGGA CTAAATGGAT TAGAGTTATG TAGAAAAATA
AGAAATGATG AAGACTATAC ACCCATACTA ATTTTGAGTG CTAAAGATAA TGAATCAGAC
AGGGTTCTTG GATTAGAGGT TGGTGCAGAT GATTATTTAA CAAAACCTTT TGGTTTAAAT
GAATTAATTG CTAGATCTAG AGCATTAATA AGAAGATCTA AACGTAATAA AAAATATATA
GAAAACTCAA AAACTGTTCT CGAGTTTAAT CATATAAAAA TGTTCTTGGA AGAATGTAGG
GTAACTTCTT TTGATAGAGA AATAACATTA TCTCCAAAAG AATTTAAATT ATTAGAGTTA
TTTATGAAAA ATCCAAAAAG AGTATGGTCA AGGGATTTAA TACTTGAAAA AATATGGGAA
ATTGACTTTA TTGGTGATAC TAAAACTGTA GATGTTCATG TTAGGTGGCT CAGAGAGAAA
TTAGAAGAAG ATCCCTCAGC TCCAAAGTTT CTTAAAACTG TAAGAGGTTT TGGATATAAG
TTTGGATGA
 
Protein sequence
MAIKDHKSLQ DSRILLVEDD KSIRLTVSET LISEGFKVSS FKDGLSALDF INNDIKKDVD 
LIILDLMLPG LNGLELCRKI RNDEDYTPIL ILSAKDNESD RVLGLEVGAD DYLTKPFGLN
ELIARSRALI RRSKRNKKYI ENSKTVLEFN HIKMFLEECR VTSFDREITL SPKEFKLLEL
FMKNPKRVWS RDLILEKIWE IDFIGDTKTV DVHVRWLREK LEEDPSAPKF LKTVRGFGYK
FG