Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0717 |
Symbol | |
ID | 3765517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 666279 |
End bp | 667007 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637797238 |
Product | two component transcriptional regulator |
Protein accession | YP_397213 |
Protein GI | 78779101 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATTA AAGATCATAA AAGTTTGCAA GACTCAAGAA TTCTTCTTGT AGAGGATGAT AAGAGTATTA GGCTTACTGT CAGTGAAACC TTGATCAGCG AAGGTTTCAA AGTATCAAGT TTCAAAGACG GTTTAAGTGC CTTAGATTTT ATTAATAATG ATATTAAAAA AGATGTTGAC CTAATAATTC TAGATTTAAT GTTGCCAGGA CTAAATGGAT TAGAGTTATG TAGAAAAATA AGAAATGATG AAGACTATAC ACCCATACTA ATTTTGAGTG CTAAAGATAA TGAATCAGAC AGGGTTCTTG GATTAGAGGT TGGTGCAGAT GATTATTTAA CAAAACCTTT TGGTTTAAAT GAATTAATTG CTAGATCTAG AGCATTAATA AGAAGATCTA AACGTAATAA AAAATATATA GAAAACTCAA AAACTGTTCT CGAGTTTAAT CATATAAAAA TGTTCTTGGA AGAATGTAGG GTAACTTCTT TTGATAGAGA AATAACATTA TCTCCAAAAG AATTTAAATT ATTAGAGTTA TTTATGAAAA ATCCAAAAAG AGTATGGTCA AGGGATTTAA TACTTGAAAA AATATGGGAA ATTGACTTTA TTGGTGATAC TAAAACTGTA GATGTTCATG TTAGGTGGCT CAGAGAGAAA TTAGAAGAAG ATCCCTCAGC TCCAAAGTTT CTTAAAACTG TAAGAGGTTT TGGATATAAG TTTGGATGA
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Protein sequence | MAIKDHKSLQ DSRILLVEDD KSIRLTVSET LISEGFKVSS FKDGLSALDF INNDIKKDVD LIILDLMLPG LNGLELCRKI RNDEDYTPIL ILSAKDNESD RVLGLEVGAD DYLTKPFGLN ELIARSRALI RRSKRNKKYI ENSKTVLEFN HIKMFLEECR VTSFDREITL SPKEFKLLEL FMKNPKRVWS RDLILEKIWE IDFIGDTKTV DVHVRWLREK LEEDPSAPKF LKTVRGFGYK FG
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