| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0676 |
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| Symbol | ispG |
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| ID | 3765477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 637292 |
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| End bp | 638509 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637797198 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_397173 |
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| Protein GI | 78779061 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTAA CTCAATCAAA AGAGGTTAAC AGTCTCTCCA AAAGATATTC AACTCATATT
GAGAGAAGGA TAACTAGAAC AGTAATGGTT GGTGATGTAG CTATTGGAAG CGATTATCCA
GTAAGAGTTC AATCGATGAT AAATGAAGAT ACTATGGATG TCGAGAATGC TTACTTAGCT
ATCAAAAGAC TTCATGATGT AGGTTGTGAA ATAGTAAGAT TAACAGTCCC TTCATTAGCA
CACGCAAAAG CAGTAGGAGA TATAAAAGCA AAATTATTAG AAAATAATAT CAAGACCCCC
TTGGTAGCTG ATGTTCACCA TAATGGTATG AAAATTGCAA TGGAGGTTGC AAAACATGTT
GATAAAGTAA GAATTAATCC TGGATTATTT GTGTTTGAAA AATCAGACCC TACAAGAACT
GAATATACAG ATGAGGAATT TGAAACTATT AAACAAACAA TACTTAAAAG ATTTACCCCT
TTAGTTGAAG TTTTAAAGGC TGAAAACAAA GCTCTAAGGA TTGGAGTTAA TCATGGTTCT
CTATCTGAGA GAATGCTTTT TACTTATGGA GATACGCCAT TAGGAATGAC AGAATCTGCG
ATGGAGTTCG TCAAAATTTG TGATGAGCTT GATTTTCATA ACATAATTAT TTCTATGAAA
GCTTCCAGGG CTCCGGTCAT GTTGGCAGCT TACAGAATGA TTGCAGATAG GCTTGACTCA
GAAGGATATA ATTATCCATT ACATTTGGGA GTGACCGAAG CTGGAGATGG TGATTATGGA
AGGATTAAAA GTACTGCCGG AATCGGAACG CTTCTAGCAG AGGGATTAGG AGATACCATT
AGGGTTTCTT TAACAGAAGC CCCAGAGAAG GAAATTCCAG TTTGCTATTC AATTTTGCAA
TCTTTAGGAT TAAGAAAAAC GATGGTTGAA TATATCAGTT GCCCTAGTTG TGGGAGAACA
CTTTTCAATT TAGAAGAAGT TGTAGATAAA GTTAGGAACG CTACTTCACA TTTAACTGGT
TTAGATATAG CAATAATGGG TTGTATAGTA AATGGACCAG GAGAAATGGC AGATGCTGAT
TATGGTTATG TTGGGAAAGG TAAAGGAACT ATTGCCTTAT ATAGAAGGAA AGAAGAGATA
AAAAGAGTAC CTGAAGATGA GGGGGTTAAT GCTTTAATCC AACTTATTAA GGATGATGGG
AAGTGGATTG ATCCTTAA
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| Protein sequence | MSLTQSKEVN SLSKRYSTHI ERRITRTVMV GDVAIGSDYP VRVQSMINED TMDVENAYLA
IKRLHDVGCE IVRLTVPSLA HAKAVGDIKA KLLENNIKTP LVADVHHNGM KIAMEVAKHV
DKVRINPGLF VFEKSDPTRT EYTDEEFETI KQTILKRFTP LVEVLKAENK ALRIGVNHGS
LSERMLFTYG DTPLGMTESA MEFVKICDEL DFHNIIISMK ASRAPVMLAA YRMIADRLDS
EGYNYPLHLG VTEAGDGDYG RIKSTAGIGT LLAEGLGDTI RVSLTEAPEK EIPVCYSILQ
SLGLRKTMVE YISCPSCGRT LFNLEEVVDK VRNATSHLTG LDIAIMGCIV NGPGEMADAD
YGYVGKGKGT IALYRRKEEI KRVPEDEGVN ALIQLIKDDG KWIDP
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