| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0675 |
|---|
| Symbol | |
|---|
| ID | 3765476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 636754 |
|---|
| End bp | 637257 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637797197 |
|---|
| Product | phage SPO1 DNA polymerase-related protein |
|---|
| Protein accession | YP_397172 |
|---|
| Protein GI | 78779060 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAGGT TAGTTATTGG GAGAGGAAGT GTATTTGCAG ATTTGTTAAT AATTGGTGAG
GCACCTGGAG CACAGGAAGA CTTAGAAGGA AAACCATATG TAGGTAAATC CGGTAAGTTA
TTAAACGAAT TGTTGATAAA AGCGGGGATT GACTATAAGG AAGATGTTTA TTTTTGCAAT
GTAATTAAAT GTCGTCCACC AAATAATAGA AAACCCACTG CTAGAGAAAT TAATATTCAT
AAACCTTGGT TATTACAGCA AATAAAGCTA GTTGATCCAA AATTTATATT ACTTACTGGT
TCGACTGCTA TGAGAGCTAT TTTAGAAGTT AAAGATCCTA TAAGTAATTT GAGAGGTCAA
TGGATTAAAA AAGATGGGAG AGAAATTATG GTAATTTTTC ATCCATCTTA TTTGTTGAGA
TTTCCTTCTA AAGAAATCAA TAAACCTTAC CATCTAACTT TGAAAGACCT AGAGAATTTA
GGTGGTAAAC TATATGCCGT ATAA
|
|---|
| Protein sequence | MKRLVIGRGS VFADLLIIGE APGAQEDLEG KPYVGKSGKL LNELLIKAGI DYKEDVYFCN
VIKCRPPNNR KPTAREINIH KPWLLQQIKL VDPKFILLTG STAMRAILEV KDPISNLRGQ
WIKKDGREIM VIFHPSYLLR FPSKEINKPY HLTLKDLENL GGKLYAV
|
|---|
| |